Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 DBET-201ENST00000630918 3363 ntBASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 AC106760.1-201ENST00000508690 800 ntBASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 AP001582.1-201ENST00000525856 295 ntBASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 KRT90P-201ENST00000549264 1064 ntBASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 AC023310.1-201ENST00000554836 735 ntBASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 AC015910.1-201ENST00000579400 975 ntBASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 MIR4538-201ENST00000581377 78 ntBASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 AP005019.2-201ENST00000615104 511 ntBASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 MIR6869-201ENST00000619434 62 ntBASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA11Q86Y39 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 AL133338.1-201ENST00000565695 1517 ntBASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA11Q86Y39 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms