Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 GHSR-202ENST00000427970 912 ntBASIC14.62□□□□□ -0.07
TNFRSF17Q02223 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 AL049840.4-201ENST00000602422 811 ntBASIC14.62□□□□□ -0.07
TNFRSF17Q02223 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.62□□□□□ -0.07
TNFRSF17Q02223 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 FLJ16779-201ENST00000612722 7638 ntBASIC14.61□□□□□ -0.07
TNFRSF17Q02223 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 AC093726.1-201ENST00000608064 963 ntBASIC14.61□□□□□ -0.07
TNFRSF17Q02223 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 AC067930.6-201ENST00000623257 4947 ntBASIC14.61□□□□□ -0.07
TNFRSF17Q02223 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 AC007541.1-201ENST00000570282 1469 ntBASIC14.61□□□□□ -0.07
TNFRSF17Q02223 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF17Q02223 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 RPL13AP25-201ENST00000484130 612 ntBASIC14.6□□□□□ -0.07
TNFRSF17Q02223 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.6□□□□□ -0.07
TNFRSF17Q02223 AC104596.2-201ENST00000512793 793 ntBASIC14.6□□□□□ -0.07
TNFRSF17Q02223 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms