Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN7AQ01118 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN7AQ01118 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN7AQ01118 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN7AQ01118 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN7AQ01118 AL359258.3-201ENST00000622910 2331 ntBASIC18.82■□□□□ 0.6
SCN7AQ01118 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN7AQ01118 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.82■□□□□ 0.6
SCN7AQ01118 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SCN7AQ01118 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC18.82■□□□□ 0.6
SCN7AQ01118 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCN7AQ01118 LY6E-208ENST00000520531 490 ntTSL 2 BASIC18.82■□□□□ 0.6
SCN7AQ01118 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN7AQ01118 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC18.82■□□□□ 0.6
SCN7AQ01118 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.82■□□□□ 0.6
SCN7AQ01118 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.82■□□□□ 0.6
SCN7AQ01118 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN7AQ01118 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.82■□□□□ 0.6
SCN7AQ01118 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SCN7AQ01118 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC18.82■□□□□ 0.6
SCN7AQ01118 RN7SL736P-201ENST00000613111 269 ntBASIC18.82■□□□□ 0.6
SCN7AQ01118 AC051619.9-201ENST00000623237 597 ntBASIC18.82■□□□□ 0.6
SCN7AQ01118 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCN7AQ01118 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.81■□□□□ 0.6
SCN7AQ01118 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.81■□□□□ 0.6
SCN7AQ01118 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
SCN7AQ01118 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCN7AQ01118 AL513523.2-202ENST00000427283 2040 ntBASIC18.81■□□□□ 0.6
SCN7AQ01118 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCN7AQ01118 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.81■□□□□ 0.6
SCN7AQ01118 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN7AQ01118 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCN7AQ01118 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCN7AQ01118 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
SCN7AQ01118 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN7AQ01118 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN7AQ01118 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.81■□□□□ 0.6
SCN7AQ01118 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN7AQ01118 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC18.81■□□□□ 0.6
SCN7AQ01118 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC18.81■□□□□ 0.6
SCN7AQ01118 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCN7AQ01118 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SCN7AQ01118 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC18.81■□□□□ 0.6
SCN7AQ01118 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC18.81■□□□□ 0.6
SCN7AQ01118 AC138894.2-201ENST00000602838 371 ntBASIC18.81■□□□□ 0.6
SCN7AQ01118 AC007881.3-201ENST00000608897 607 ntBASIC18.81■□□□□ 0.6
SCN7AQ01118 MIR7845-201ENST00000618396 99 ntBASIC18.81■□□□□ 0.6
SCN7AQ01118 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.81■□□□□ 0.6
SCN7AQ01118 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.81■□□□□ 0.6
SCN7AQ01118 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCN7AQ01118 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN7AQ01118 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SCN7AQ01118 CICP13-201ENST00000422015 2789 ntBASIC18.81■□□□□ 0.6
SCN7AQ01118 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
SCN7AQ01118 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.81■□□□□ 0.6
SCN7AQ01118 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCN7AQ01118 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC18.81■□□□□ 0.6
SCN7AQ01118 AC012508.2-201ENST00000567613 1472 ntBASIC18.81■□□□□ 0.6
SCN7AQ01118 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCN7AQ01118 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN7AQ01118 TBC1D3J-201ENST00000620719 1426 ntBASIC18.8■□□□□ 0.6
SCN7AQ01118 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.8■□□□□ 0.6
SCN7AQ01118 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN7AQ01118 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCN7AQ01118 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN7AQ01118 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.8■□□□□ 0.6
SCN7AQ01118 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.8■□□□□ 0.6
SCN7AQ01118 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.8■□□□□ 0.6
SCN7AQ01118 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SCN7AQ01118 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SCN7AQ01118 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18.8■□□□□ 0.6
SCN7AQ01118 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN7AQ01118 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC18.8■□□□□ 0.6
SCN7AQ01118 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.8■□□□□ 0.6
SCN7AQ01118 MIR6720-201ENST00000611664 98 ntBASIC18.8■□□□□ 0.6
SCN7AQ01118 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.8■□□□□ 0.6
SCN7AQ01118 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN7AQ01118 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN7AQ01118 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN7AQ01118 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCN7AQ01118 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN7AQ01118 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN7AQ01118 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.8■□□□□ 0.6
SCN7AQ01118 AC090616.6-203ENST00000579186 1945 ntBASIC18.8■□□□□ 0.6
SCN7AQ01118 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN7AQ01118 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN7AQ01118 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.79■□□□□ 0.6
SCN7AQ01118 CYP4F23P-201ENST00000593402 1579 ntBASIC18.79■□□□□ 0.6
SCN7AQ01118 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC18.79■□□□□ 0.6
SCN7AQ01118 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.79■□□□□ 0.6
SCN7AQ01118 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC18.79■□□□□ 0.6
SCN7AQ01118 GCOM2-201ENST00000509133 1104 ntBASIC18.79■□□□□ 0.6
SCN7AQ01118 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.79■□□□□ 0.6
SCN7AQ01118 MBP-227ENST00000526111 581 ntTSL 4 BASIC18.79■□□□□ 0.6
SCN7AQ01118 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC18.79■□□□□ 0.6
SCN7AQ01118 PAM16-211ENST00000575848 518 ntTSL 3 BASIC18.79■□□□□ 0.6
SCN7AQ01118 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SCN7AQ01118 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC18.79■□□□□ 0.6
SCN7AQ01118 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN7AQ01118 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms