Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IRX3P78415 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
IRX3P78415 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IRX3P78415 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IRX3P78415 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IRX3P78415 AL133267.1-201ENST00000398220 340 ntBASIC18.09■□□□□ 0.49
IRX3P78415 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.09■□□□□ 0.49
IRX3P78415 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.09■□□□□ 0.49
IRX3P78415 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.09■□□□□ 0.49
IRX3P78415 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.09■□□□□ 0.49
IRX3P78415 KRT18P25-201ENST00000508931 1278 ntBASIC18.09■□□□□ 0.49
IRX3P78415 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.09■□□□□ 0.49
IRX3P78415 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IRX3P78415 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IRX3P78415 USP31-203ENST00000567975 2142 ntTSL 2 BASIC18.09■□□□□ 0.49
IRX3P78415 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.09■□□□□ 0.49
IRX3P78415 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.09■□□□□ 0.49
IRX3P78415 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IRX3P78415 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
IRX3P78415 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IRX3P78415 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.09■□□□□ 0.49
IRX3P78415 AC132872.4-202ENST00000622924 2756 ntBASIC18.09■□□□□ 0.49
IRX3P78415 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IRX3P78415 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IRX3P78415 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.09■□□□□ 0.49
IRX3P78415 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IRX3P78415 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
IRX3P78415 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
IRX3P78415 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.09■□□□□ 0.49
IRX3P78415 AC006449.6-201ENST00000612330 2296 ntBASIC18.09■□□□□ 0.49
IRX3P78415 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
IRX3P78415 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IRX3P78415 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
IRX3P78415 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.08■□□□□ 0.49
IRX3P78415 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.08■□□□□ 0.49
IRX3P78415 CICP13-201ENST00000422015 2789 ntBASIC18.08■□□□□ 0.49
IRX3P78415 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
IRX3P78415 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
IRX3P78415 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IRX3P78415 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.08■□□□□ 0.49
IRX3P78415 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
IRX3P78415 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.08■□□□□ 0.49
IRX3P78415 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.08■□□□□ 0.49
IRX3P78415 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC18.08■□□□□ 0.49
IRX3P78415 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
IRX3P78415 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
IRX3P78415 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.08■□□□□ 0.48
IRX3P78415 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IRX3P78415 MIR1247-201ENST00000408206 136 ntBASIC18.08■□□□□ 0.48
IRX3P78415 CNN2P8-201ENST00000421872 913 ntBASIC18.08■□□□□ 0.48
IRX3P78415 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.08■□□□□ 0.48
IRX3P78415 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.08■□□□□ 0.48
IRX3P78415 AC025279.2-201ENST00000569730 653 ntBASIC18.08■□□□□ 0.48
IRX3P78415 AC015910.1-201ENST00000579400 975 ntBASIC18.08■□□□□ 0.48
IRX3P78415 MIR3615-201ENST00000581999 87 ntBASIC18.08■□□□□ 0.48
IRX3P78415 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.08■□□□□ 0.48
IRX3P78415 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.08■□□□□ 0.48
IRX3P78415 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IRX3P78415 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
IRX3P78415 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
IRX3P78415 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IRX3P78415 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC18.08■□□□□ 0.48
IRX3P78415 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
IRX3P78415 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
IRX3P78415 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IRX3P78415 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
IRX3P78415 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
IRX3P78415 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC18.08■□□□□ 0.48
IRX3P78415 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IRX3P78415 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IRX3P78415 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
IRX3P78415 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
IRX3P78415 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IRX3P78415 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.07■□□□□ 0.48
IRX3P78415 AC063926.3-201ENST00000624734 5658 ntBASIC18.07■□□□□ 0.48
IRX3P78415 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
IRX3P78415 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.07■□□□□ 0.48
IRX3P78415 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.07■□□□□ 0.48
IRX3P78415 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
IRX3P78415 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
IRX3P78415 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
IRX3P78415 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IRX3P78415 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
IRX3P78415 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.07■□□□□ 0.48
IRX3P78415 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms