Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VBP1P61758 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.96□□□□□ -0.17
VBP1P61758 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VBP1P61758 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.96□□□□□ -0.17
VBP1P61758 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.96□□□□□ -0.17
VBP1P61758 AL589702.1-201ENST00000641229 1509 ntBASIC13.96□□□□□ -0.17
VBP1P61758 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
VBP1P61758 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VBP1P61758 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
VBP1P61758 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.96□□□□□ -0.17
VBP1P61758 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VBP1P61758 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
VBP1P61758 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
VBP1P61758 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VBP1P61758 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.96□□□□□ -0.17
VBP1P61758 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VBP1P61758 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.96□□□□□ -0.17
VBP1P61758 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.96□□□□□ -0.17
VBP1P61758 AL031055.1-201ENST00000606362 631 ntBASIC13.96□□□□□ -0.17
VBP1P61758 AL121672.3-201ENST00000608644 468 ntBASIC13.96□□□□□ -0.17
VBP1P61758 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.96□□□□□ -0.17
VBP1P61758 AC097493.4-201ENST00000641197 219 ntBASIC13.96□□□□□ -0.17
VBP1P61758 AL805961.1-202ENST00000641562 540 ntBASIC13.96□□□□□ -0.17
VBP1P61758 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
VBP1P61758 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VBP1P61758 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VBP1P61758 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.96□□□□□ -0.18
VBP1P61758 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VBP1P61758 AC015802.1-201ENST00000588104 1449 ntBASIC13.96□□□□□ -0.18
VBP1P61758 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.96□□□□□ -0.18
VBP1P61758 AC073508.3-201ENST00000619697 1419 ntBASIC13.96□□□□□ -0.18
VBP1P61758 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.96□□□□□ -0.18
VBP1P61758 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.96□□□□□ -0.18
VBP1P61758 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.96□□□□□ -0.18
VBP1P61758 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
VBP1P61758 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VBP1P61758 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
VBP1P61758 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
VBP1P61758 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VBP1P61758 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
VBP1P61758 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.95□□□□□ -0.18
VBP1P61758 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.95□□□□□ -0.18
VBP1P61758 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.95□□□□□ -0.18
VBP1P61758 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.95□□□□□ -0.18
VBP1P61758 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.95□□□□□ -0.18
VBP1P61758 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VBP1P61758 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.95□□□□□ -0.18
VBP1P61758 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.95□□□□□ -0.18
VBP1P61758 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.95□□□□□ -0.18
VBP1P61758 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.95□□□□□ -0.18
VBP1P61758 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
VBP1P61758 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
VBP1P61758 AC130686.1-201ENST00000622936 2466 ntBASIC13.95□□□□□ -0.18
VBP1P61758 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 TOB2P1-201ENST00000469761 992 ntBASIC13.95□□□□□ -0.18
VBP1P61758 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
VBP1P61758 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.95□□□□□ -0.18
VBP1P61758 MIR5100-201ENST00000579544 119 ntBASIC13.95□□□□□ -0.18
VBP1P61758 AC006011.2-201ENST00000621313 1158 ntBASIC13.95□□□□□ -0.18
VBP1P61758 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
VBP1P61758 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
VBP1P61758 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VBP1P61758 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.95□□□□□ -0.18
VBP1P61758 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 BNIP3P1-202ENST00000550043 1585 ntBASIC13.95□□□□□ -0.18
VBP1P61758 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.95□□□□□ -0.18
VBP1P61758 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.95□□□□□ -0.18
VBP1P61758 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VBP1P61758 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.95□□□□□ -0.18
VBP1P61758 AC016734.2-201ENST00000624325 1377 ntBASIC13.95□□□□□ -0.18
VBP1P61758 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VBP1P61758 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.95□□□□□ -0.18
VBP1P61758 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VBP1P61758 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.94□□□□□ -0.18
VBP1P61758 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
VBP1P61758 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VBP1P61758 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.94□□□□□ -0.18
VBP1P61758 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
VBP1P61758 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms