Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NUP98P52948 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUP98P52948 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
NUP98P52948 RN7SL720P-201ENST00000488178 304 ntBASIC18.86■□□□□ 0.61
NUP98P52948 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.86■□□□□ 0.61
NUP98P52948 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.86■□□□□ 0.61
NUP98P52948 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NUP98P52948 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC18.86■□□□□ 0.61
NUP98P52948 MIR3907-201ENST00000579424 151 ntBASIC18.86■□□□□ 0.61
NUP98P52948 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.86■□□□□ 0.61
NUP98P52948 AC079336.7-201ENST00000623428 1078 ntBASIC18.86■□□□□ 0.61
NUP98P52948 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUP98P52948 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NUP98P52948 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.86■□□□□ 0.61
NUP98P52948 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.86■□□□□ 0.61
NUP98P52948 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.86■□□□□ 0.61
NUP98P52948 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.86■□□□□ 0.61
NUP98P52948 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NUP98P52948 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.86■□□□□ 0.61
NUP98P52948 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUP98P52948 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUP98P52948 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUP98P52948 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC18.86■□□□□ 0.61
NUP98P52948 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUP98P52948 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
NUP98P52948 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.86■□□□□ 0.61
NUP98P52948 KRT8P29-201ENST00000420409 1371 ntBASIC18.86■□□□□ 0.61
NUP98P52948 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUP98P52948 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUP98P52948 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
NUP98P52948 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUP98P52948 AC091046.1-201ENST00000331871 207 ntBASIC18.86■□□□□ 0.61
NUP98P52948 AK6-201ENST00000380818 1183 ntTSL 2 BASIC18.86■□□□□ 0.61
NUP98P52948 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NUP98P52948 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUP98P52948 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.86■□□□□ 0.61
NUP98P52948 AL596276.2-201ENST00000447525 331 ntBASIC18.86■□□□□ 0.61
NUP98P52948 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC18.86■□□□□ 0.61
NUP98P52948 HNRNPA1P36-201ENST00000521313 955 ntBASIC18.86■□□□□ 0.61
NUP98P52948 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.86■□□□□ 0.61
NUP98P52948 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC18.86■□□□□ 0.61
NUP98P52948 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC18.86■□□□□ 0.61
NUP98P52948 AL133499.1-201ENST00000596207 608 ntBASIC18.86■□□□□ 0.61
NUP98P52948 AP000346.4-201ENST00000614827 381 ntBASIC18.86■□□□□ 0.61
NUP98P52948 AC100757.4-201ENST00000626934 759 ntBASIC18.86■□□□□ 0.61
NUP98P52948 AL805961.1-203ENST00000641078 1258 ntBASIC18.86■□□□□ 0.61
NUP98P52948 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC18.86■□□□□ 0.61
NUP98P52948 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUP98P52948 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUP98P52948 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUP98P52948 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NUP98P52948 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.85■□□□□ 0.61
NUP98P52948 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUP98P52948 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUP98P52948 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NUP98P52948 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NUP98P52948 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUP98P52948 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NUP98P52948 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC18.85■□□□□ 0.61
NUP98P52948 AL136295.7-201ENST00000619226 1200 ntBASIC18.85■□□□□ 0.61
NUP98P52948 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.85■□□□□ 0.61
NUP98P52948 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.85■□□□□ 0.61
NUP98P52948 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NUP98P52948 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.85■□□□□ 0.61
NUP98P52948 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUP98P52948 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUP98P52948 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
NUP98P52948 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUP98P52948 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUP98P52948 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC18.85■□□□□ 0.61
NUP98P52948 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
NUP98P52948 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NUP98P52948 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.84■□□□□ 0.61
NUP98P52948 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.84■□□□□ 0.61
NUP98P52948 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUP98P52948 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NUP98P52948 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.84■□□□□ 0.61
NUP98P52948 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUP98P52948 MBLAC2-202ENST00000514906 1936 ntBASIC18.84■□□□□ 0.61
NUP98P52948 MSRA-203ENST00000441698 788 ntTSL 2 BASIC18.84■□□□□ 0.61
NUP98P52948 FTLP1-201ENST00000449155 526 ntBASIC18.84■□□□□ 0.61
NUP98P52948 AC021723.1-201ENST00000486306 515 ntBASIC18.84■□□□□ 0.61
NUP98P52948 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC18.84■□□□□ 0.61
NUP98P52948 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC18.84■□□□□ 0.61
NUP98P52948 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC18.84■□□□□ 0.61
NUP98P52948 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUP98P52948 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.84■□□□□ 0.61
NUP98P52948 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NUP98P52948 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NUP98P52948 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.84■□□□□ 0.61
NUP98P52948 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
NUP98P52948 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUP98P52948 RN7SKP214-201ENST00000364208 315 ntBASIC18.84■□□□□ 0.61
NUP98P52948 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NUP98P52948 ELK2AP-201ENST00000392510 1007 ntBASIC18.84■□□□□ 0.61
NUP98P52948 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.84■□□□□ 0.61
NUP98P52948 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC18.84■□□□□ 0.61
NUP98P52948 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC18.84■□□□□ 0.61
NUP98P52948 AC024681.1-201ENST00000521917 487 ntBASIC18.84■□□□□ 0.61
NUP98P52948 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms