Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A4P31645 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A4P31645 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC6A4P31645 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A4P31645 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A4P31645 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A4P31645 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A4P31645 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A4P31645 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC6A4P31645 AL158070.2-201ENST00000623713 1621 ntBASIC15.84■□□□□ 0.13
SLC6A4P31645 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A4P31645 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC6A4P31645 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC6A4P31645 C18orf15-201ENST00000623680 2534 ntBASIC15.84■□□□□ 0.13
SLC6A4P31645 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A4P31645 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A4P31645 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SLC6A4P31645 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SLC6A4P31645 AC234783.1-201ENST00000441761 496 ntBASIC15.84■□□□□ 0.13
SLC6A4P31645 AL355864.2-201ENST00000447420 863 ntBASIC15.84■□□□□ 0.13
SLC6A4P31645 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC6A4P31645 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC6A4P31645 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A4P31645 FTH1P14-201ENST00000482930 551 ntBASIC15.84■□□□□ 0.13
SLC6A4P31645 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SLC6A4P31645 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SLC6A4P31645 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC6A4P31645 MIR4259-201ENST00000584466 101 ntBASIC15.84■□□□□ 0.13
SLC6A4P31645 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC6A4P31645 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC6A4P31645 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC6A4P31645 AL008721.1-201ENST00000609964 604 ntBASIC15.84■□□□□ 0.13
SLC6A4P31645 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A4P31645 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SLC6A4P31645 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.84■□□□□ 0.13
SLC6A4P31645 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SLC6A4P31645 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A4P31645 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SLC6A4P31645 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A4P31645 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A4P31645 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A4P31645 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC6A4P31645 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A4P31645 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A4P31645 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC6A4P31645 AC105917.1-201ENST00000506637 2539 ntBASIC15.84■□□□□ 0.13
SLC6A4P31645 PDIA3P1-201ENST00000471856 1510 ntBASIC15.84■□□□□ 0.13
SLC6A4P31645 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SLC6A4P31645 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC6A4P31645 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SLC6A4P31645 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SLC6A4P31645 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC6A4P31645 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC6A4P31645 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC6A4P31645 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC6A4P31645 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC6A4P31645 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC6A4P31645 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SLC6A4P31645 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.83■□□□□ 0.12
SLC6A4P31645 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC6A4P31645 AC104457.1-201ENST00000401024 814 ntBASIC15.83■□□□□ 0.12
SLC6A4P31645 KLF2P2-201ENST00000416807 1039 ntBASIC15.83■□□□□ 0.12
SLC6A4P31645 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 KRT43P-201ENST00000434019 910 ntBASIC15.83■□□□□ 0.12
SLC6A4P31645 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC6A4P31645 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC6A4P31645 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SLC6A4P31645 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC6A4P31645 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC6A4P31645 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC6A4P31645 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC6A4P31645 AC244669.2-201ENST00000612320 853 ntBASIC15.83■□□□□ 0.12
SLC6A4P31645 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC6A4P31645 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SLC6A4P31645 PRSS30P-206ENST00000641773 873 ntBASIC15.83■□□□□ 0.12
SLC6A4P31645 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC6A4P31645 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
SLC6A4P31645 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC6A4P31645 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SLC6A4P31645 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms