Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC19.75■□□□□ 0.75
RXRBP28702 PPIA-208ENST00000489459 907 ntTSL 2 BASIC19.75■□□□□ 0.75
RXRBP28702 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
RXRBP28702 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC19.75■□□□□ 0.75
RXRBP28702 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC19.75■□□□□ 0.75
RXRBP28702 AC140113.1-201ENST00000603467 169 ntBASIC19.75■□□□□ 0.75
RXRBP28702 AC138696.2-201ENST00000607376 223 ntBASIC19.75■□□□□ 0.75
RXRBP28702 AC006483.2-201ENST00000609813 515 ntBASIC19.75■□□□□ 0.75
RXRBP28702 PPIA-210ENST00000620047 827 ntTSL 5 BASIC19.75■□□□□ 0.75
RXRBP28702 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.75■□□□□ 0.75
RXRBP28702 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RXRBP28702 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RXRBP28702 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RXRBP28702 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RXRBP28702 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.75■□□□□ 0.75
RXRBP28702 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
RXRBP28702 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRBP28702 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRBP28702 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RXRBP28702 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
RXRBP28702 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRBP28702 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRBP28702 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RXRBP28702 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RXRBP28702 PTGER4P2-201ENST00000328411 252 ntBASIC19.74■□□□□ 0.75
RXRBP28702 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRBP28702 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC19.74■□□□□ 0.75
RXRBP28702 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRBP28702 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC19.74■□□□□ 0.75
RXRBP28702 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC19.74■□□□□ 0.75
RXRBP28702 AC010900.1-201ENST00000449849 1296 ntBASIC19.74■□□□□ 0.75
RXRBP28702 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC19.74■□□□□ 0.75
RXRBP28702 PTGER4P3-201ENST00000458150 252 ntBASIC19.74■□□□□ 0.75
RXRBP28702 AC006122.1-201ENST00000493323 440 ntBASIC19.74■□□□□ 0.75
RXRBP28702 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.74■□□□□ 0.75
RXRBP28702 AC084262.1-201ENST00000567818 751 ntBASIC19.74■□□□□ 0.75
RXRBP28702 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC19.74■□□□□ 0.75
RXRBP28702 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRBP28702 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC19.74■□□□□ 0.75
RXRBP28702 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRBP28702 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC19.74■□□□□ 0.75
RXRBP28702 NEFHP1-201ENST00000412845 2629 ntBASIC19.74■□□□□ 0.75
RXRBP28702 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRBP28702 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRBP28702 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.74■□□□□ 0.75
RXRBP28702 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRBP28702 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRBP28702 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RXRBP28702 AC144522.1-201ENST00000625111 1658 ntBASIC19.74■□□□□ 0.75
RXRBP28702 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.74■□□□□ 0.75
RXRBP28702 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRBP28702 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRBP28702 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRBP28702 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC19.74■□□□□ 0.75
RXRBP28702 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RXRBP28702 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RXRBP28702 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RXRBP28702 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RXRBP28702 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RXRBP28702 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC19.73■□□□□ 0.75
RXRBP28702 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RXRBP28702 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RXRBP28702 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RXRBP28702 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RXRBP28702 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RXRBP28702 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC19.73■□□□□ 0.75
RXRBP28702 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC19.73■□□□□ 0.75
RXRBP28702 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC19.73■□□□□ 0.75
RXRBP28702 RN7SKP109-201ENST00000410592 316 ntBASIC19.73■□□□□ 0.75
RXRBP28702 SKA2-202ENST00000437036 625 ntTSL 2 BASIC19.73■□□□□ 0.75
RXRBP28702 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC19.73■□□□□ 0.75
RXRBP28702 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RXRBP28702 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RXRBP28702 RN7SL582P-201ENST00000491078 279 ntBASIC19.73■□□□□ 0.75
RXRBP28702 GOLGA2P7-209ENST00000560408 745 ntBASIC19.73■□□□□ 0.75
RXRBP28702 AL590235.1-201ENST00000564650 861 ntBASIC19.73■□□□□ 0.75
RXRBP28702 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RXRBP28702 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RXRBP28702 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC19.73■□□□□ 0.75
RXRBP28702 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RXRBP28702 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RXRBP28702 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RXRBP28702 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RXRBP28702 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.73■□□□□ 0.75
RXRBP28702 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.73■□□□□ 0.75
RXRBP28702 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RXRBP28702 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC19.73■□□□□ 0.75
RXRBP28702 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RXRBP28702 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RXRBP28702 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RXRBP28702 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
RXRBP28702 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RXRBP28702 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RXRBP28702 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RXRBP28702 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRBP28702 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RXRBP28702 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RXRBP28702 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRBP28702 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRBP28702 RPL14-203ENST00000416518 812 ntTSL 3 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms