Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 ALG1L8P-201ENST00000533887 760 ntBASIC14.46□□□□□ -0.09
TNFRSF1BP20333 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 AC022145.2-201ENST00000598203 171 ntBASIC14.46□□□□□ -0.09
TNFRSF1BP20333 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TNFRSF1BP20333 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.46□□□□□ -0.1
TNFRSF1BP20333 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TNFRSF1BP20333 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TNFRSF1BP20333 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.46□□□□□ -0.1
TNFRSF1BP20333 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.46□□□□□ -0.1
TNFRSF1BP20333 LINC01230-201ENST00000625222 3017 ntBASIC14.46□□□□□ -0.1
TNFRSF1BP20333 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TNFRSF1BP20333 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
TNFRSF1BP20333 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
TNFRSF1BP20333 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TNFRSF1BP20333 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
TNFRSF1BP20333 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TNFRSF1BP20333 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.46□□□□□ -0.1
TNFRSF1BP20333 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
TNFRSF1BP20333 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 REXO1L2P-201ENST00000425429 2069 ntBASIC14.45□□□□□ -0.1
TNFRSF1BP20333 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 AL353705.2-201ENST00000428243 662 ntBASIC14.45□□□□□ -0.1
TNFRSF1BP20333 AC005237.2-201ENST00000434368 219 ntBASIC14.45□□□□□ -0.1
TNFRSF1BP20333 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.45□□□□□ -0.1
TNFRSF1BP20333 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFRSF1BP20333 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF1BP20333 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF1BP20333 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
TNFRSF1BP20333 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
TNFRSF1BP20333 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF1BP20333 AP000845.1-201ENST00000581677 2131 ntBASIC14.44□□□□□ -0.1
TNFRSF1BP20333 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF1BP20333 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFRSF1BP20333 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.44□□□□□ -0.1
TNFRSF1BP20333 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TNFRSF1BP20333 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.44□□□□□ -0.1
TNFRSF1BP20333 TARDBPP1-201ENST00000442013 1203 ntBASIC14.44□□□□□ -0.1
TNFRSF1BP20333 ACTG1P14-201ENST00000446382 1122 ntBASIC14.44□□□□□ -0.1
TNFRSF1BP20333 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFRSF1BP20333 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms