Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
COL1A1P02452 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL1A1P02452 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.36■□□□□ 0.53
COL1A1P02452 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL1A1P02452 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.36■□□□□ 0.53
COL1A1P02452 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.36■□□□□ 0.53
COL1A1P02452 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.36■□□□□ 0.53
COL1A1P02452 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.36■□□□□ 0.53
COL1A1P02452 UPF3AP2-201ENST00000457924 1132 ntBASIC18.36■□□□□ 0.53
COL1A1P02452 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.36■□□□□ 0.53
COL1A1P02452 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC18.36■□□□□ 0.53
COL1A1P02452 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.36■□□□□ 0.53
COL1A1P02452 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC18.36■□□□□ 0.53
COL1A1P02452 MIR4783-201ENST00000580343 82 ntBASIC18.36■□□□□ 0.53
COL1A1P02452 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.36■□□□□ 0.53
COL1A1P02452 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
COL1A1P02452 DIO1-215ENST00000610607 796 ntTSL 5 BASIC18.36■□□□□ 0.53
COL1A1P02452 AL603764.1-201ENST00000636452 321 ntBASIC18.36■□□□□ 0.53
COL1A1P02452 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL1A1P02452 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.36■□□□□ 0.53
COL1A1P02452 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL1A1P02452 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.36■□□□□ 0.53
COL1A1P02452 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL1A1P02452 AC009093.2-202ENST00000620513 2079 ntBASIC18.36■□□□□ 0.53
COL1A1P02452 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COL1A1P02452 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.35■□□□□ 0.53
COL1A1P02452 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
COL1A1P02452 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
COL1A1P02452 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.35■□□□□ 0.53
COL1A1P02452 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC18.35■□□□□ 0.53
COL1A1P02452 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC18.35■□□□□ 0.53
COL1A1P02452 CHMP1AP1-201ENST00000445563 662 ntBASIC18.35■□□□□ 0.53
COL1A1P02452 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.35■□□□□ 0.53
COL1A1P02452 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.35■□□□□ 0.53
COL1A1P02452 NDUFV2P1-201ENST00000596415 907 ntBASIC18.35■□□□□ 0.53
COL1A1P02452 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.35■□□□□ 0.53
COL1A1P02452 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC18.35■□□□□ 0.53
COL1A1P02452 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.35■□□□□ 0.53
COL1A1P02452 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.35■□□□□ 0.53
COL1A1P02452 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL1A1P02452 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL1A1P02452 KRT8P19-201ENST00000551916 1455 ntBASIC18.34■□□□□ 0.53
COL1A1P02452 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COL1A1P02452 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL1A1P02452 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL1A1P02452 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
COL1A1P02452 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.34■□□□□ 0.53
COL1A1P02452 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.34■□□□□ 0.53
COL1A1P02452 MESTP3-201ENST00000503460 968 ntBASIC18.34■□□□□ 0.53
COL1A1P02452 PARP8-206ENST00000503665 572 ntTSL 4 BASIC18.34■□□□□ 0.53
COL1A1P02452 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC18.34■□□□□ 0.53
COL1A1P02452 AC126915.1-201ENST00000522847 1038 ntBASIC18.34■□□□□ 0.53
COL1A1P02452 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.34■□□□□ 0.53
COL1A1P02452 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
COL1A1P02452 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
COL1A1P02452 AC079328.1-201ENST00000560358 952 ntBASIC18.34■□□□□ 0.53
COL1A1P02452 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.34■□□□□ 0.53
COL1A1P02452 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC18.34■□□□□ 0.53
COL1A1P02452 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.34■□□□□ 0.53
COL1A1P02452 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.34■□□□□ 0.53
COL1A1P02452 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.34■□□□□ 0.53
COL1A1P02452 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18.34■□□□□ 0.53
COL1A1P02452 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.34■□□□□ 0.53
COL1A1P02452 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL1A1P02452 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL1A1P02452 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL1A1P02452 AC023024.2-201ENST00000623561 1993 ntBASIC18.34■□□□□ 0.53
COL1A1P02452 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL1A1P02452 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL1A1P02452 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.34■□□□□ 0.53
COL1A1P02452 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.34■□□□□ 0.53
COL1A1P02452 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
COL1A1P02452 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
COL1A1P02452 ANKRD30BP2-201ENST00000435744 1610 ntBASIC18.34■□□□□ 0.53
COL1A1P02452 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.34■□□□□ 0.53
COL1A1P02452 INE2-201ENST00000630399 1874 ntBASIC18.34■□□□□ 0.53
COL1A1P02452 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.34■□□□□ 0.53
COL1A1P02452 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.34■□□□□ 0.53
COL1A1P02452 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL1A1P02452 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
COL1A1P02452 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms