Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UPK1AO00322 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.71□□□□□ -0.05
UPK1AO00322 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
UPK1AO00322 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.71□□□□□ -0.05
UPK1AO00322 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.71□□□□□ -0.05
UPK1AO00322 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
UPK1AO00322 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
UPK1AO00322 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
UPK1AO00322 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
UPK1AO00322 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
UPK1AO00322 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.71□□□□□ -0.05
UPK1AO00322 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.71□□□□□ -0.05
UPK1AO00322 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.71□□□□□ -0.05
UPK1AO00322 AC097493.3-201ENST00000509725 367 ntBASIC14.71□□□□□ -0.05
UPK1AO00322 AC010336.2-201ENST00000564226 506 ntBASIC14.71□□□□□ -0.05
UPK1AO00322 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.71□□□□□ -0.05
UPK1AO00322 AL158211.3-201ENST00000607385 239 ntBASIC14.71□□□□□ -0.05
UPK1AO00322 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.71□□□□□ -0.05
UPK1AO00322 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
UPK1AO00322 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.71□□□□□ -0.05
UPK1AO00322 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
UPK1AO00322 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.71□□□□□ -0.05
UPK1AO00322 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
UPK1AO00322 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UPK1AO00322 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.71□□□□□ -0.05
UPK1AO00322 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
UPK1AO00322 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
UPK1AO00322 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
UPK1AO00322 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
UPK1AO00322 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
UPK1AO00322 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
UPK1AO00322 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
UPK1AO00322 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
UPK1AO00322 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.7□□□□□ -0.06
UPK1AO00322 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.7□□□□□ -0.06
UPK1AO00322 TREML5P-201ENST00000421694 576 ntBASIC14.7□□□□□ -0.06
UPK1AO00322 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.7□□□□□ -0.06
UPK1AO00322 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.7□□□□□ -0.06
UPK1AO00322 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.7□□□□□ -0.06
UPK1AO00322 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 RN7SL618P-201ENST00000477850 296 ntBASIC14.7□□□□□ -0.06
UPK1AO00322 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.7□□□□□ -0.06
UPK1AO00322 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.7□□□□□ -0.06
UPK1AO00322 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.7□□□□□ -0.06
UPK1AO00322 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.7□□□□□ -0.06
UPK1AO00322 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.7□□□□□ -0.06
UPK1AO00322 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.7□□□□□ -0.06
UPK1AO00322 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.7□□□□□ -0.06
UPK1AO00322 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
UPK1AO00322 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.7□□□□□ -0.06
UPK1AO00322 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.7□□□□□ -0.06
UPK1AO00322 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
UPK1AO00322 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
UPK1AO00322 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
UPK1AO00322 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.7□□□□□ -0.06
UPK1AO00322 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.7□□□□□ -0.06
UPK1AO00322 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.7□□□□□ -0.06
UPK1AO00322 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms