Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CACNB4O00305 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CACNB4O00305 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
CACNB4O00305 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CACNB4O00305 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CACNB4O00305 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CACNB4O00305 MIR1909-201ENST00000411312 80 ntBASIC15.3■□□□□ 0.04
CACNB4O00305 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CACNB4O00305 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CACNB4O00305 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.3■□□□□ 0.04
CACNB4O00305 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CACNB4O00305 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.3■□□□□ 0.04
CACNB4O00305 AC012441.1-201ENST00000446669 685 ntBASIC15.3■□□□□ 0.04
CACNB4O00305 AC022210.1-201ENST00000449856 793 ntBASIC15.3■□□□□ 0.04
CACNB4O00305 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.3■□□□□ 0.04
CACNB4O00305 CROCCP4-201ENST00000457096 498 ntBASIC15.3■□□□□ 0.04
CACNB4O00305 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.3■□□□□ 0.04
CACNB4O00305 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CACNB4O00305 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.3■□□□□ 0.04
CACNB4O00305 AP001889.1-201ENST00000525414 633 ntBASIC15.3■□□□□ 0.04
CACNB4O00305 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.3■□□□□ 0.04
CACNB4O00305 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CACNB4O00305 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CACNB4O00305 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.3■□□□□ 0.04
CACNB4O00305 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.3■□□□□ 0.04
CACNB4O00305 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.3■□□□□ 0.04
CACNB4O00305 BX539320.1-201ENST00000623759 877 ntBASIC15.3■□□□□ 0.04
CACNB4O00305 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CACNB4O00305 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CACNB4O00305 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CACNB4O00305 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CACNB4O00305 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CACNB4O00305 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CACNB4O00305 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CACNB4O00305 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.3■□□□□ 0.04
CACNB4O00305 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.29■□□□□ 0.04
CACNB4O00305 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CACNB4O00305 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.29■□□□□ 0.04
CACNB4O00305 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CACNB4O00305 AC092127.1-201ENST00000567093 3455 ntBASIC15.29■□□□□ 0.04
CACNB4O00305 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CACNB4O00305 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.29■□□□□ 0.04
CACNB4O00305 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CACNB4O00305 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CACNB4O00305 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.29■□□□□ 0.04
CACNB4O00305 AC084364.1-201ENST00000551967 1556 ntBASIC15.29■□□□□ 0.04
CACNB4O00305 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.29■□□□□ 0.04
CACNB4O00305 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CACNB4O00305 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CACNB4O00305 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CACNB4O00305 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CACNB4O00305 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.29■□□□□ 0.04
CACNB4O00305 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.29■□□□□ 0.04
CACNB4O00305 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.29■□□□□ 0.04
CACNB4O00305 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.29■□□□□ 0.04
CACNB4O00305 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.29■□□□□ 0.04
CACNB4O00305 KRT18P25-201ENST00000508931 1278 ntBASIC15.29■□□□□ 0.04
CACNB4O00305 AC104989.1-201ENST00000519711 778 ntBASIC15.29■□□□□ 0.04
CACNB4O00305 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CACNB4O00305 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CACNB4O00305 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.29■□□□□ 0.04
CACNB4O00305 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.29■□□□□ 0.04
CACNB4O00305 AP005482.1-201ENST00000563722 1273 ntBASIC15.29■□□□□ 0.04
CACNB4O00305 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.29■□□□□ 0.04
CACNB4O00305 AC133552.6-201ENST00000613406 534 ntBASIC15.29■□□□□ 0.04
CACNB4O00305 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CACNB4O00305 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.29■□□□□ 0.04
CACNB4O00305 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
CACNB4O00305 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CACNB4O00305 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CACNB4O00305 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CACNB4O00305 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CACNB4O00305 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CACNB4O00305 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CACNB4O00305 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CACNB4O00305 AP005117.1-202ENST00000581724 1908 ntBASIC15.29■□□□□ 0.04
CACNB4O00305 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CACNB4O00305 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CACNB4O00305 NORAD-201ENST00000565493 5339 ntBASIC15.29■□□□□ 0.04
CACNB4O00305 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.28■□□□□ 0.04
CACNB4O00305 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CACNB4O00305 AL513477.1-201ENST00000602865 2407 ntBASIC15.28■□□□□ 0.04
CACNB4O00305 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CACNB4O00305 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CACNB4O00305 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CACNB4O00305 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CACNB4O00305 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.28■□□□□ 0.04
CACNB4O00305 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CACNB4O00305 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CACNB4O00305 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CACNB4O00305 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.28■□□□□ 0.04
CACNB4O00305 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CACNB4O00305 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CACNB4O00305 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.28■□□□□ 0.04
CACNB4O00305 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CACNB4O00305 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CACNB4O00305 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CACNB4O00305 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.28■□□□□ 0.04
CACNB4O00305 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CACNB4O00305 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms