Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 AC112492.5-201ENST00000421897 457 ntBASIC16.14■□□□□ 0.17
SRRM3A6NNA2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 INE1-201ENST00000456273 945 ntBASIC16.14■□□□□ 0.17
SRRM3A6NNA2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 RARRES2P8-201ENST00000566335 367 ntBASIC16.14■□□□□ 0.17
SRRM3A6NNA2 SPTSSB-204ENST00000617024 1292 ntBASIC16.14■□□□□ 0.17
SRRM3A6NNA2 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.13■□□□□ 0.17
SRRM3A6NNA2 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 AC100757.3-201ENST00000622361 1406 ntBASIC16.13■□□□□ 0.17
SRRM3A6NNA2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 HCG4-201ENST00000418983 998 ntBASIC16.13■□□□□ 0.17
SRRM3A6NNA2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 KRT8P23-201ENST00000560090 1207 ntBASIC16.13■□□□□ 0.17
SRRM3A6NNA2 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 AL590560.3-201ENST00000623350 461 ntBASIC16.13■□□□□ 0.17
SRRM3A6NNA2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 AL033527.4-201ENST00000641026 673 ntBASIC16.13■□□□□ 0.17
SRRM3A6NNA2 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 MBLAC2-202ENST00000514906 1936 ntBASIC16.13■□□□□ 0.17
SRRM3A6NNA2 BX640514.1-201ENST00000583223 1918 ntBASIC16.13■□□□□ 0.17
SRRM3A6NNA2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SRRM3A6NNA2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 AC010327.5-201ENST00000586923 3061 ntBASIC16.12■□□□□ 0.17
SRRM3A6NNA2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 TSSK5P-201ENST00000423978 907 ntBASIC16.12■□□□□ 0.17
SRRM3A6NNA2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 AC027369.6-201ENST00000525520 931 ntBASIC16.12■□□□□ 0.17
SRRM3A6NNA2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SRRM3A6NNA2 KRT17P8-201ENST00000540749 863 ntBASIC16.12■□□□□ 0.17
SRRM3A6NNA2 RAB43P1-201ENST00000561790 589 ntBASIC16.12■□□□□ 0.17
SRRM3A6NNA2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms