Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 AJ011931.1-201ENST00000618749 2492 ntBASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.14■□□□□ 0.01
PDLIM5Q96HC4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 CICP24-201ENST00000605464 2705 ntBASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 MRPS18AP1-201ENST00000414458 589 ntBASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 SAMD11P1-201ENST00000571429 661 ntBASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 GPALPP1-207ENST00000611650 899 ntBASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 FGD5P1-202ENST00000614866 2498 ntBASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 CICP23-201ENST00000605013 2741 ntBASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM5Q96HC4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 BASP1P1-201ENST00000430708 665 ntBASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 AL589987.1-201ENST00000453380 819 ntBASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 AL512638.1-201ENST00000457493 794 ntBASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 SPDYE18-201ENST00000510091 1050 ntBASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.12■□□□□ 0.01
PDLIM5Q96HC4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms