Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 LRRC59-203ENST00000576448 1531 ntBASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 AC079316.1-201ENST00000548397 411 ntBASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 RN7SL48P-201ENST00000579283 293 ntBASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 PAUPAR-201ENST00000630360 2965 ntBASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 AL360270.3-201ENST00000609118 1348 ntBASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD1Q8NHV4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 KRT8P44-201ENST00000441609 1350 ntBASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 C18orf15-201ENST00000623680 2534 ntBASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 RNA5SP486-201ENST00000515961 83 ntBASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 AC022616.1-201ENST00000518688 554 ntBASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.93■□□□□ 0.46
NEDD1Q8NHV4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 REXO1L5P-201ENST00000622260 2098 ntBASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 RNA5SP412-201ENST00000516234 123 ntBASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 DUX4L47-201ENST00000566374 394 ntBASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 AL603764.1-201ENST00000636452 321 ntBASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 AC008687.7-202ENST00000637404 953 ntBASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.92■□□□□ 0.46
NEDD1Q8NHV4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms