Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AL022328.1-201ENST00000610050 478 ntBASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 AC134312.5-201ENST00000568031 1313 ntBASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 AC009090.5-201ENST00000624886 2285 ntBASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 AC084364.1-201ENST00000551967 1556 ntBASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 AC092850.2-201ENST00000623821 2697 ntBASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 AL138799.1-201ENST00000448213 1675 ntBASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 MIR1909-201ENST00000411312 80 ntBASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 BAATP1-201ENST00000412284 1225 ntBASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 MIR6805-201ENST00000615055 62 ntBASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 AC022188.1-201ENST00000620960 1664 ntBASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCN4BQ8IWT1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SCN4BQ8IWT1 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SCN4BQ8IWT1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.33■□□□□ 0.21
SCN4BQ8IWT1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.33■□□□□ 0.21
SCN4BQ8IWT1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.33■□□□□ 0.21
SCN4BQ8IWT1 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 AC022210.1-201ENST00000449856 793 ntBASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 GAPDHP40-201ENST00000505218 1006 ntBASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 AP001889.1-201ENST00000525414 633 ntBASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SCN4BQ8IWT1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms