Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CCDC149Q6ZUS6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCDC149Q6ZUS6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 FLJ16779-201ENST00000612722 7638 ntBASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 AC138028.6-201ENST00000616106 1482 ntBASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 RNU1-114P-201ENST00000365297 166 ntBASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 AL645937.2-201ENST00000396808 931 ntBASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 MIR1202-201ENST00000408529 83 ntBASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 AC004066.1-201ENST00000502488 802 ntBASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 AP006547.1-201ENST00000563435 692 ntBASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 RN7SL48P-201ENST00000579283 293 ntBASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 AC020914.3-201ENST00000594712 304 ntBASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 AC006453.4-201ENST00000636949 1252 ntBASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC149Q6ZUS6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 TPM3P8-201ENST00000330554 643 ntBASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 HOMER2P2-201ENST00000451621 847 ntBASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 ACTG1P17-201ENST00000558391 1119 ntBASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 AC104982.3-201ENST00000581995 514 ntBASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 AC079328.2-201ENST00000561241 3354 ntBASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CCDC149Q6ZUS6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms