Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SREBF2Q12772 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.48■□□□□ 0.39
SREBF2Q12772 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SREBF2Q12772 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SREBF2Q12772 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC17.48■□□□□ 0.39
SREBF2Q12772 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SREBF2Q12772 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SREBF2Q12772 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.48■□□□□ 0.39
SREBF2Q12772 AC008723.1-201ENST00000506922 207 ntBASIC17.48■□□□□ 0.39
SREBF2Q12772 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.48■□□□□ 0.39
SREBF2Q12772 RBM8B-201ENST00000555532 525 ntBASIC17.48■□□□□ 0.39
SREBF2Q12772 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.48■□□□□ 0.39
SREBF2Q12772 AC141586.1-203ENST00000567242 366 ntBASIC17.48■□□□□ 0.39
SREBF2Q12772 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17.48■□□□□ 0.39
SREBF2Q12772 AC138894.2-201ENST00000602838 371 ntBASIC17.48■□□□□ 0.39
SREBF2Q12772 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.48■□□□□ 0.39
SREBF2Q12772 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.48■□□□□ 0.39
SREBF2Q12772 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SREBF2Q12772 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SREBF2Q12772 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SREBF2Q12772 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SREBF2Q12772 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SREBF2Q12772 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.48■□□□□ 0.39
SREBF2Q12772 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SREBF2Q12772 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
SREBF2Q12772 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.47■□□□□ 0.39
SREBF2Q12772 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.47■□□□□ 0.39
SREBF2Q12772 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.47■□□□□ 0.39
SREBF2Q12772 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.47■□□□□ 0.39
SREBF2Q12772 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SREBF2Q12772 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SREBF2Q12772 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.47■□□□□ 0.39
SREBF2Q12772 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.47■□□□□ 0.39
SREBF2Q12772 AC130709.1-201ENST00000484779 1212 ntBASIC17.47■□□□□ 0.39
SREBF2Q12772 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.47■□□□□ 0.39
SREBF2Q12772 AC026803.1-201ENST00000569130 274 ntBASIC17.47■□□□□ 0.39
SREBF2Q12772 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.47■□□□□ 0.39
SREBF2Q12772 AC007718.1-201ENST00000621078 280 ntBASIC17.47■□□□□ 0.39
SREBF2Q12772 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
SREBF2Q12772 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.47■□□□□ 0.39
SREBF2Q12772 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SREBF2Q12772 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.47■□□□□ 0.39
SREBF2Q12772 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.47■□□□□ 0.39
SREBF2Q12772 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SREBF2Q12772 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SREBF2Q12772 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SREBF2Q12772 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SREBF2Q12772 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SREBF2Q12772 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SREBF2Q12772 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SREBF2Q12772 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SREBF2Q12772 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SREBF2Q12772 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SREBF2Q12772 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.46■□□□□ 0.39
SREBF2Q12772 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SREBF2Q12772 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SREBF2Q12772 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SREBF2Q12772 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
SREBF2Q12772 OR2K2-202ENST00000374428 1038 ntBASIC17.46■□□□□ 0.39
SREBF2Q12772 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SREBF2Q12772 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.46■□□□□ 0.39
SREBF2Q12772 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SREBF2Q12772 RPL8P2-201ENST00000430538 502 ntBASIC17.46■□□□□ 0.39
SREBF2Q12772 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.46■□□□□ 0.39
SREBF2Q12772 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC17.46■□□□□ 0.39
SREBF2Q12772 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC17.46■□□□□ 0.39
SREBF2Q12772 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.46■□□□□ 0.39
SREBF2Q12772 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.46■□□□□ 0.39
SREBF2Q12772 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC17.46■□□□□ 0.39
SREBF2Q12772 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.46■□□□□ 0.39
SREBF2Q12772 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.46■□□□□ 0.39
SREBF2Q12772 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.46■□□□□ 0.39
SREBF2Q12772 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SREBF2Q12772 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SREBF2Q12772 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SREBF2Q12772 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SREBF2Q12772 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms