Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.73□□□□□ -0.37
CEACAM3P40198 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CEACAM3P40198 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.72□□□□□ -0.37
CEACAM3P40198 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CEACAM3P40198 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.72□□□□□ -0.37
CEACAM3P40198 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.72□□□□□ -0.37
CEACAM3P40198 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.72□□□□□ -0.37
CEACAM3P40198 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CEACAM3P40198 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CEACAM3P40198 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CEACAM3P40198 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 AC127383.1-201ENST00000444697 1800 ntBASIC12.72□□□□□ -0.37
CEACAM3P40198 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 AC008741.2-201ENST00000612792 3115 ntBASIC12.72□□□□□ -0.37
CEACAM3P40198 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.72□□□□□ -0.37
CEACAM3P40198 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.72□□□□□ -0.37
CEACAM3P40198 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.72□□□□□ -0.37
CEACAM3P40198 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.72□□□□□ -0.37
CEACAM3P40198 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.72□□□□□ -0.37
CEACAM3P40198 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.72□□□□□ -0.37
CEACAM3P40198 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 AC093004.1-201ENST00000508850 424 ntBASIC12.72□□□□□ -0.37
CEACAM3P40198 DOC2GP-202ENST00000514950 1163 ntBASIC12.72□□□□□ -0.37
CEACAM3P40198 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.72□□□□□ -0.37
CEACAM3P40198 TPRX2P-201ENST00000535362 881 ntBASIC12.72□□□□□ -0.37
CEACAM3P40198 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.72□□□□□ -0.37
CEACAM3P40198 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.72□□□□□ -0.37
CEACAM3P40198 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.72□□□□□ -0.37
CEACAM3P40198 AC036164.1-201ENST00000570544 333 ntBASIC12.72□□□□□ -0.37
CEACAM3P40198 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
CEACAM3P40198 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
CEACAM3P40198 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.72□□□□□ -0.37
CEACAM3P40198 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.72□□□□□ -0.37
CEACAM3P40198 LINC01115-203ENST00000606068 577 ntBASIC12.72□□□□□ -0.37
CEACAM3P40198 AC004233.3-201ENST00000607794 1269 ntBASIC12.72□□□□□ -0.37
CEACAM3P40198 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.72□□□□□ -0.37
CEACAM3P40198 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
CEACAM3P40198 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CEACAM3P40198 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.72□□□□□ -0.37
CEACAM3P40198 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CEACAM3P40198 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 AC087481.3-201ENST00000602886 1894 ntBASIC12.72□□□□□ -0.37
CEACAM3P40198 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CEACAM3P40198 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.72□□□□□ -0.37
CEACAM3P40198 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CEACAM3P40198 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.71□□□□□ -0.37
CEACAM3P40198 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.71□□□□□ -0.37
CEACAM3P40198 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CEACAM3P40198 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CEACAM3P40198 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CEACAM3P40198 CICP13-201ENST00000422015 2789 ntBASIC12.71□□□□□ -0.37
CEACAM3P40198 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.71□□□□□ -0.37
CEACAM3P40198 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CEACAM3P40198 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CEACAM3P40198 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CEACAM3P40198 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CEACAM3P40198 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
CEACAM3P40198 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CEACAM3P40198 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CEACAM3P40198 FAM45BP-202ENST00000592932 1624 ntBASIC12.71□□□□□ -0.37
CEACAM3P40198 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CEACAM3P40198 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CEACAM3P40198 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CEACAM3P40198 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.71□□□□□ -0.37
CEACAM3P40198 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.71□□□□□ -0.37
CEACAM3P40198 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.71□□□□□ -0.37
CEACAM3P40198 BCRP1-201ENST00000444246 691 ntBASIC12.71□□□□□ -0.37
CEACAM3P40198 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CEACAM3P40198 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.71□□□□□ -0.37
CEACAM3P40198 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CEACAM3P40198 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CEACAM3P40198 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.71□□□□□ -0.37
CEACAM3P40198 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CEACAM3P40198 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.71□□□□□ -0.37
CEACAM3P40198 AC104794.3-201ENST00000566840 1248 ntBASIC12.71□□□□□ -0.37
CEACAM3P40198 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms