Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
TCRAP04437 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC11.87□□□□□ -0.51
TCRAP04437 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.87□□□□□ -0.51
TCRAP04437 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.87□□□□□ -0.51
TCRAP04437 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC11.87□□□□□ -0.51
TCRAP04437 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC11.87□□□□□ -0.51
TCRAP04437 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 AC011467.4-201ENST00000594891 528 ntBASIC11.87□□□□□ -0.51
TCRAP04437 AL445228.2-201ENST00000605589 952 ntBASIC11.87□□□□□ -0.51
TCRAP04437 PRKN-208ENST00000610470 531 ntTSL 2 BASIC11.87□□□□□ -0.51
TCRAP04437 PRKN-209ENST00000612485 225 ntTSL 5 BASIC11.87□□□□□ -0.51
TCRAP04437 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.87□□□□□ -0.51
TCRAP04437 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
TCRAP04437 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
TCRAP04437 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.87□□□□□ -0.51
TCRAP04437 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
TCRAP04437 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 AC084364.1-201ENST00000551967 1556 ntBASIC11.87□□□□□ -0.51
TCRAP04437 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
TCRAP04437 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC11.87□□□□□ -0.51
TCRAP04437 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC11.87□□□□□ -0.51
TCRAP04437 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC11.87□□□□□ -0.51
TCRAP04437 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
TCRAP04437 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
TCRAP04437 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
TCRAP04437 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
TCRAP04437 SRC-202ENST00000373558 4304 ntTSL 5 BASIC11.87□□□□□ -0.51
TCRAP04437 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TCRAP04437 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
TCRAP04437 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TCRAP04437 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
TCRAP04437 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 AC041040.2-201ENST00000622926 2899 ntBASIC11.86□□□□□ -0.51
TCRAP04437 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
TCRAP04437 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 AC015656.1-201ENST00000624209 3578 ntBASIC11.86□□□□□ -0.51
TCRAP04437 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRAP04437 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRAP04437 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.86□□□□□ -0.51
TCRAP04437 AC002056.1-201ENST00000395613 760 ntBASIC11.86□□□□□ -0.51
TCRAP04437 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRAP04437 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.86□□□□□ -0.51
TCRAP04437 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.86□□□□□ -0.51
TCRAP04437 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.86□□□□□ -0.51
TCRAP04437 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC11.86□□□□□ -0.51
TCRAP04437 AC004877.2-201ENST00000623941 599 ntBASIC11.86□□□□□ -0.51
TCRAP04437 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC11.86□□□□□ -0.51
TCRAP04437 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.86□□□□□ -0.51
TCRAP04437 VPS51-217ENST00000639871 243 ntTSL 5 BASIC11.86□□□□□ -0.51
TCRAP04437 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRAP04437 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRAP04437 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
TCRAP04437 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TCRAP04437 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
TCRAP04437 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
TCRAP04437 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
TCRAP04437 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms