Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ZIC3O60481 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.92□□□□□ -0.18
ZIC3O60481 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
ZIC3O60481 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.91□□□□□ -0.18
ZIC3O60481 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ZIC3O60481 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
ZIC3O60481 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
ZIC3O60481 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ZIC3O60481 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
ZIC3O60481 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.91□□□□□ -0.18
ZIC3O60481 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.91□□□□□ -0.18
ZIC3O60481 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.91□□□□□ -0.18
ZIC3O60481 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ZIC3O60481 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.91□□□□□ -0.18
ZIC3O60481 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.91□□□□□ -0.18
ZIC3O60481 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.91□□□□□ -0.18
ZIC3O60481 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
ZIC3O60481 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
ZIC3O60481 AC022137.2-201ENST00000503482 481 ntBASIC13.91□□□□□ -0.18
ZIC3O60481 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.91□□□□□ -0.18
ZIC3O60481 AC106886.1-201ENST00000568660 600 ntBASIC13.91□□□□□ -0.18
ZIC3O60481 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.91□□□□□ -0.18
ZIC3O60481 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.91□□□□□ -0.18
ZIC3O60481 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.91□□□□□ -0.18
ZIC3O60481 AL162274.1-201ENST00000617191 1098 ntBASIC13.91□□□□□ -0.18
ZIC3O60481 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ZIC3O60481 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 KRT8P44-201ENST00000441609 1350 ntBASIC13.91□□□□□ -0.18
ZIC3O60481 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
ZIC3O60481 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
ZIC3O60481 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZIC3O60481 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 AC134312.5-201ENST00000568031 1313 ntBASIC13.9□□□□□ -0.18
ZIC3O60481 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ZIC3O60481 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.9□□□□□ -0.18
ZIC3O60481 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.9□□□□□ -0.18
ZIC3O60481 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ZIC3O60481 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.9□□□□□ -0.18
ZIC3O60481 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
ZIC3O60481 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
ZIC3O60481 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
ZIC3O60481 AL645937.2-201ENST00000396808 931 ntBASIC13.9□□□□□ -0.18
ZIC3O60481 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.9□□□□□ -0.18
ZIC3O60481 NUS1P3-201ENST00000423502 862 ntBASIC13.9□□□□□ -0.18
ZIC3O60481 AC012441.1-201ENST00000446669 685 ntBASIC13.9□□□□□ -0.18
ZIC3O60481 AP001889.1-201ENST00000525414 633 ntBASIC13.9□□□□□ -0.18
ZIC3O60481 AC068587.3-201ENST00000526613 355 ntBASIC13.9□□□□□ -0.18
ZIC3O60481 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.9□□□□□ -0.18
ZIC3O60481 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.9□□□□□ -0.18
ZIC3O60481 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.9□□□□□ -0.18
ZIC3O60481 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.9□□□□□ -0.18
ZIC3O60481 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.9□□□□□ -0.18
ZIC3O60481 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.9□□□□□ -0.18
ZIC3O60481 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.9□□□□□ -0.18
ZIC3O60481 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.9□□□□□ -0.18
ZIC3O60481 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZIC3O60481 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ZIC3O60481 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ZIC3O60481 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms