Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01558Q9Y6Z2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01558Q9Y6Z2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
LINC01558Q9Y6Z2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
LINC01558Q9Y6Z2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01558Q9Y6Z2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01558Q9Y6Z2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01558Q9Y6Z2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01558Q9Y6Z2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01558Q9Y6Z2 GUSBP5-202ENST00000510805 1989 ntBASIC12.18□□□□□ -0.46
LINC01558Q9Y6Z2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC12.17□□□□□ -0.46
LINC01558Q9Y6Z2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01558Q9Y6Z2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC12.17□□□□□ -0.46
LINC01558Q9Y6Z2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
LINC01558Q9Y6Z2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01558Q9Y6Z2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01558Q9Y6Z2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01558Q9Y6Z2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
LINC01558Q9Y6Z2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01558Q9Y6Z2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01558Q9Y6Z2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
LINC01558Q9Y6Z2 AC007952.6-201ENST00000573168 2673 ntBASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 AC003957.1-201ENST00000625108 2673 ntBASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC12.16□□□□□ -0.46
LINC01558Q9Y6Z2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LINC01558Q9Y6Z2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC01558Q9Y6Z2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC01558Q9Y6Z2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC01558Q9Y6Z2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC01558Q9Y6Z2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01558Q9Y6Z2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC01558Q9Y6Z2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01558Q9Y6Z2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC01558Q9Y6Z2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01558Q9Y6Z2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01558Q9Y6Z2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC01558Q9Y6Z2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01558Q9Y6Z2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01558Q9Y6Z2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
LINC01558Q9Y6Z2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LINC01558Q9Y6Z2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01558Q9Y6Z2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01558Q9Y6Z2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01558Q9Y6Z2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
LINC01558Q9Y6Z2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01558Q9Y6Z2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01558Q9Y6Z2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01558Q9Y6Z2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC12.14□□□□□ -0.47
LINC01558Q9Y6Z2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01558Q9Y6Z2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LINC01558Q9Y6Z2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01558Q9Y6Z2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC01558Q9Y6Z2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
LINC01558Q9Y6Z2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01558Q9Y6Z2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC01558Q9Y6Z2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01558Q9Y6Z2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01558Q9Y6Z2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC12.14□□□□□ -0.47
LINC01558Q9Y6Z2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01558Q9Y6Z2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC01558Q9Y6Z2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC01558Q9Y6Z2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
LINC01558Q9Y6Z2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
LINC01558Q9Y6Z2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01558Q9Y6Z2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01558Q9Y6Z2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01558Q9Y6Z2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01558Q9Y6Z2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
LINC01558Q9Y6Z2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01558Q9Y6Z2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC01558Q9Y6Z2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01558Q9Y6Z2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LINC01558Q9Y6Z2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC01558Q9Y6Z2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01558Q9Y6Z2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
LINC01558Q9Y6Z2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LINC01558Q9Y6Z2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC01558Q9Y6Z2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01558Q9Y6Z2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LINC01558Q9Y6Z2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC01558Q9Y6Z2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms