Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MS4A3Q96HJ5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
MS4A3Q96HJ5 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
MS4A3Q96HJ5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MS4A3Q96HJ5 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MS4A3Q96HJ5 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MS4A3Q96HJ5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MS4A3Q96HJ5 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.7■□□□□ 0.9
MS4A3Q96HJ5 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MS4A3Q96HJ5 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.69■□□□□ 0.9
MS4A3Q96HJ5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MS4A3Q96HJ5 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MS4A3Q96HJ5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.69■□□□□ 0.9
MS4A3Q96HJ5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.69■□□□□ 0.9
MS4A3Q96HJ5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MS4A3Q96HJ5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MS4A3Q96HJ5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MS4A3Q96HJ5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A3Q96HJ5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.68■□□□□ 0.9
MS4A3Q96HJ5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A3Q96HJ5 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A3Q96HJ5 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.68■□□□□ 0.9
MS4A3Q96HJ5 PVT1_1.1-201ENST00000615125 194 ntBASIC20.68■□□□□ 0.9
MS4A3Q96HJ5 CFTRP2-201ENST00000634304 199 ntBASIC20.68■□□□□ 0.9
MS4A3Q96HJ5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.68■□□□□ 0.9
MS4A3Q96HJ5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A3Q96HJ5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
MS4A3Q96HJ5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
MS4A3Q96HJ5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
MS4A3Q96HJ5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.67■□□□□ 0.9
MS4A3Q96HJ5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
MS4A3Q96HJ5 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MS4A3Q96HJ5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.67■□□□□ 0.9
MS4A3Q96HJ5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MS4A3Q96HJ5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
MS4A3Q96HJ5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
MS4A3Q96HJ5 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A3Q96HJ5 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A3Q96HJ5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.66■□□□□ 0.9
MS4A3Q96HJ5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A3Q96HJ5 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A3Q96HJ5 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A3Q96HJ5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A3Q96HJ5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A3Q96HJ5 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A3Q96HJ5 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A3Q96HJ5 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A3Q96HJ5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A3Q96HJ5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.65■□□□□ 0.9
MS4A3Q96HJ5 LONRF2P2-201ENST00000439212 571 ntBASIC20.65■□□□□ 0.9
MS4A3Q96HJ5 CLDN5-201ENST00000403084 2357 ntBASIC20.65■□□□□ 0.9
MS4A3Q96HJ5 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A3Q96HJ5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A3Q96HJ5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
MS4A3Q96HJ5 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MS4A3Q96HJ5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
MS4A3Q96HJ5 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A3Q96HJ5 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A3Q96HJ5 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A3Q96HJ5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.64■□□□□ 0.89
MS4A3Q96HJ5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A3Q96HJ5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.64■□□□□ 0.89
MS4A3Q96HJ5 AC074183.2-201ENST00000623112 922 ntBASIC20.64■□□□□ 0.89
MS4A3Q96HJ5 AC005786.4-201ENST00000623369 682 ntBASIC20.64■□□□□ 0.89
MS4A3Q96HJ5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A3Q96HJ5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A3Q96HJ5 AC022211.4-201ENST00000625094 2161 ntBASIC20.63■□□□□ 0.89
MS4A3Q96HJ5 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A3Q96HJ5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A3Q96HJ5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.63■□□□□ 0.89
MS4A3Q96HJ5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.63■□□□□ 0.89
MS4A3Q96HJ5 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A3Q96HJ5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A3Q96HJ5 KRT8P33-201ENST00000508125 1423 ntBASIC20.62■□□□□ 0.89
MS4A3Q96HJ5 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A3Q96HJ5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A3Q96HJ5 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A3Q96HJ5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.62■□□□□ 0.89
MS4A3Q96HJ5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MS4A3Q96HJ5 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A3Q96HJ5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A3Q96HJ5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.61■□□□□ 0.89
MS4A3Q96HJ5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.61■□□□□ 0.89
MS4A3Q96HJ5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.61■□□□□ 0.89
MS4A3Q96HJ5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.61■□□□□ 0.89
MS4A3Q96HJ5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A3Q96HJ5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MS4A3Q96HJ5 AC079834.2-201ENST00000609776 1949 ntBASIC20.61■□□□□ 0.89
MS4A3Q96HJ5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
MS4A3Q96HJ5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A3Q96HJ5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.6■□□□□ 0.89
MS4A3Q96HJ5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A3Q96HJ5 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A3Q96HJ5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
MS4A3Q96HJ5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A3Q96HJ5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.6■□□□□ 0.89
MS4A3Q96HJ5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MS4A3Q96HJ5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.6■□□□□ 0.89
MS4A3Q96HJ5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.6■□□□□ 0.89
MS4A3Q96HJ5 RN7SL718P-201ENST00000581254 303 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms