Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 tN(GUU)PtN(GUU)P 74 nt5.46□□□□□ -1.54
CLP1Q08685 YJU2YKL095W 837 nt5.46□□□□□ -1.54
CLP1Q08685 YOL131WYOL131W 327 nt5.46□□□□□ -1.54
CLP1Q08685 GRE1YPL223C 507 nt5.46□□□□□ -1.54
CLP1Q08685 SAM4YPL273W 978 nt5.46□□□□□ -1.54
CLP1Q08685 YPR195CYPR195C 330 nt5.46□□□□□ -1.54
CLP1Q08685 SNT2YGL131C 4212 nt5.46□□□□□ -1.54
CLP1Q08685 SAP155YFR040W 3009 nt5.46□□□□□ -1.54
CLP1Q08685 MEC3YLR288C 1425 nt5.46□□□□□ -1.54
CLP1Q08685 SHE10YGL228W 1734 nt5.45□□□□□ -1.54
CLP1Q08685 RIM101YHL027W 1878 nt5.45□□□□□ -1.54
CLP1Q08685 BUL1YMR275C 2931 nt5.45□□□□□ -1.54
CLP1Q08685 NOB1YOR056C 1380 nt5.45□□□□□ -1.54
CLP1Q08685 UTP18YJL069C 1785 nt5.45□□□□□ -1.54
CLP1Q08685 GET3YDL100C 1065 nt5.45□□□□□ -1.54
CLP1Q08685 CSR1YLR380W 1227 nt5.45□□□□□ -1.54
CLP1Q08685 GFD1YMR255W 567 nt5.45□□□□□ -1.54
CLP1Q08685 YHR182WYHR182W 2358 nt5.44□□□□□ -1.54
CLP1Q08685 IDP1YDL066W 1287 nt5.44□□□□□ -1.54
CLP1Q08685 VTC2YFL004W 2487 nt5.44□□□□□ -1.54
CLP1Q08685 YEH1YLL012W 1722 nt5.44□□□□□ -1.54
CLP1Q08685 YEF1YEL041W 1488 nt5.44□□□□□ -1.54
CLP1Q08685 NDC1YML031W 1968 nt5.44□□□□□ -1.54
CLP1Q08685 UGO1YDR470C 1509 nt5.43□□□□□ -1.54
CLP1Q08685 MTC1YJL123C 1437 nt5.43□□□□□ -1.54
CLP1Q08685 CAB4YGR277C 918 nt5.43□□□□□ -1.54
CLP1Q08685 tR(ACG)JtR(ACG)J 73 nt5.43□□□□□ -1.54
CLP1Q08685 ATP1YBL099W 1638 nt5.43□□□□□ -1.54
CLP1Q08685 KRS1YDR037W 1776 nt5.42□□□□□ -1.54
CLP1Q08685 DPH2YKL191W 1605 nt5.42□□□□□ -1.54
CLP1Q08685 MCM4YPR019W 2802 nt5.42□□□□□ -1.54
CLP1Q08685 CHO1YER026C 831 nt5.42□□□□□ -1.54
CLP1Q08685 ATP14YLR295C 375 nt5.42□□□□□ -1.54
CLP1Q08685 PPG1YNR032W 1107 nt5.42□□□□□ -1.54
CLP1Q08685 YHR045WYHR045W 1683 nt5.41□□□□□ -1.54
CLP1Q08685 EPS1YIL005W 2106 nt5.41□□□□□ -1.54
CLP1Q08685 PHO8YDR481C 1701 nt5.41□□□□□ -1.54
CLP1Q08685 SCS2YER120W 735 nt5.41□□□□□ -1.54
CLP1Q08685 POM33YLL023C 840 nt5.41□□□□□ -1.54
CLP1Q08685 MMP1YLL061W 1752 nt5.41□□□□□ -1.54
CLP1Q08685 YLH47YPR125W 1365 nt5.41□□□□□ -1.54
CLP1Q08685 ENP1YBR247C 1452 nt5.4□□□□□ -1.54
CLP1Q08685 NGR1YBR212W 2019 nt5.4□□□□□ -1.54
CLP1Q08685 FZO1YBR179C 2568 nt5.4□□□□□ -1.54
CLP1Q08685 APE1YKL103C 1545 nt5.4□□□□□ -1.54
CLP1Q08685 RRP45YDR280W 918 nt5.4□□□□□ -1.54
CLP1Q08685 IPK1YDR315C 846 nt5.4□□□□□ -1.54
CLP1Q08685 CBF1YJR060W 1056 nt5.4□□□□□ -1.54
CLP1Q08685 YNR048WYNR048W 1182 nt5.4□□□□□ -1.54
CLP1Q08685 YBR126W-AYBR126W-A 207 nt5.4□□□□□ -1.54
CLP1Q08685 MET8YBR213W 825 nt5.4□□□□□ -1.54
CLP1Q08685 GIP1YBR045C 1920 nt5.4□□□□□ -1.55
CLP1Q08685 GEP3YOR205C 1671 nt5.4□□□□□ -1.55
CLP1Q08685 STL1YDR536W 1710 nt5.4□□□□□ -1.55
CLP1Q08685 FAA3YIL009W 2085 nt5.39□□□□□ -1.55
CLP1Q08685 STP4YDL048C 1473 nt5.39□□□□□ -1.55
CLP1Q08685 MSS116YDR194C 1995 nt5.39□□□□□ -1.55
CLP1Q08685 GIP2YER054C 1647 nt5.39□□□□□ -1.55
CLP1Q08685 YER084WYER084W 387 nt5.39□□□□□ -1.55
CLP1Q08685 YFR035CYFR035C 345 nt5.39□□□□□ -1.55
CLP1Q08685 UBC4YBR082C 447 nt5.39□□□□□ -1.55
CLP1Q08685 GAL4YPL248C 2646 nt5.39□□□□□ -1.55
CLP1Q08685 RPT1YKL145W 1404 nt5.39□□□□□ -1.55
CLP1Q08685 YAP1YML007W 1953 nt5.38□□□□□ -1.55
CLP1Q08685 NOC4YPR144C 1659 nt5.37□□□□□ -1.55
CLP1Q08685 QDR3YBR043C 2070 nt5.37□□□□□ -1.55
CLP1Q08685 YLR317WYLR317W 435 nt5.37□□□□□ -1.55
CLP1Q08685 UTP7YER082C 1665 nt5.37□□□□□ -1.55
CLP1Q08685 IPI1YHR085W 1005 nt5.36□□□□□ -1.55
CLP1Q08685 PFA3YNL326C 1011 nt5.36□□□□□ -1.55
CLP1Q08685 NPT1YOR209C 1290 nt5.36□□□□□ -1.55
CLP1Q08685 TOS4YLR183C 1470 nt5.36□□□□□ -1.55
CLP1Q08685 PRP43YGL120C 2304 nt5.36□□□□□ -1.55
CLP1Q08685 HSF1YGL073W 2502 nt5.35□□□□□ -1.55
CLP1Q08685 TBF1YPL128C 1689 nt5.35□□□□□ -1.55
CLP1Q08685 RER2YBR002C 861 nt5.35□□□□□ -1.55
CLP1Q08685 YPL062WYPL062W 405 nt5.35□□□□□ -1.55
CLP1Q08685 RET1YOR207C 3450 nt5.35□□□□□ -1.55
CLP1Q08685 ENT2YLR206W 1842 nt5.34□□□□□ -1.55
CLP1Q08685 CPS1YJL172W 1731 nt5.34□□□□□ -1.55
CLP1Q08685 tX(XXX)DtX(XXX)D 100 nt5.34□□□□□ -1.55
CLP1Q08685 HLJ1YMR161W 675 nt5.34□□□□□ -1.55
CLP1Q08685 DAL81YIR023W 2913 nt5.34□□□□□ -1.55
CLP1Q08685 FRE1YLR214W 2061 nt5.34□□□□□ -1.55
CLP1Q08685 GPR1YDL035C 2886 nt5.34□□□□□ -1.55
CLP1Q08685 FAA4YMR246W 2085 nt5.33□□□□□ -1.56
CLP1Q08685 MTQ2YDR140W 666 nt5.33□□□□□ -1.56
CLP1Q08685 RMA1YKL132C 1293 nt5.33□□□□□ -1.56
CLP1Q08685 COX11YPL132W 903 nt5.33□□□□□ -1.56
CLP1Q08685 RBD2YPL246C 789 nt5.33□□□□□ -1.56
CLP1Q08685 GYP1YOR070C 1914 nt5.33□□□□□ -1.56
CLP1Q08685 SFI1YLL003W 2841 nt5.32□□□□□ -1.56
CLP1Q08685 YHR127WYHR127W 732 nt5.32□□□□□ -1.56
CLP1Q08685 OST3YOR085W 1053 nt5.32□□□□□ -1.56
CLP1Q08685 ACC1YNR016C 6702 nt5.32□□□□□ -1.56
CLP1Q08685 ALG2YGL065C 1512 nt5.32□□□□□ -1.56
CLP1Q08685 BAP2YBR068C 1830 nt5.32□□□□□ -1.56
CLP1Q08685 DED81YHR019C 1665 nt5.31□□□□□ -1.56
CLP1Q08685 THI21YPL258C 1656 nt5.31□□□□□ -1.56
CLP1Q08685 ZUO1YGR285C 1302 nt5.31□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms