Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 KRE9YJL174W 831 nt5.69□□□□□ -1.5
VPS38Q05919 MRP17YKL003C 396 nt5.69□□□□□ -1.5
VPS38Q05919 YNL108CYNL108C 813 nt5.69□□□□□ -1.5
VPS38Q05919 YBR298C-AYBR298C-A 222 nt5.69□□□□□ -1.5
VPS38Q05919 PUS1YPL212C 1635 nt5.68□□□□□ -1.5
VPS38Q05919 CTR3YLR411W 726 nt5.68□□□□□ -1.5
VPS38Q05919 MRPL24YMR193W 777 nt5.68□□□□□ -1.5
VPS38Q05919 HMT1YBR034C 1047 nt5.68□□□□□ -1.5
VPS38Q05919 RPL21BYPL079W 483 nt5.68□□□□□ -1.5
VPS38Q05919 YPR150WYPR150W 522 nt5.68□□□□□ -1.5
VPS38Q05919 CUE2YKL090W 1332 nt5.68□□□□□ -1.5
VPS38Q05919 CRZ1YNL027W 2037 nt5.67□□□□□ -1.5
VPS38Q05919 SPG1YGR236C 288 nt5.67□□□□□ -1.5
VPS38Q05919 COX17YLL009C 210 nt5.67□□□□□ -1.5
VPS38Q05919 DCN1YLR128W 810 nt5.67□□□□□ -1.5
VPS38Q05919 FET3YMR058W 1911 nt5.67□□□□□ -1.5
VPS38Q05919 UTP9YHR196W 1728 nt5.67□□□□□ -1.5
VPS38Q05919 ECM3YOR092W 1842 nt5.67□□□□□ -1.5
VPS38Q05919 MAL11YGR289C 1851 nt5.66□□□□□ -1.5
VPS38Q05919 MKC7YDR144C 1791 nt5.66□□□□□ -1.5
VPS38Q05919 YDR396WYDR396W 501 nt5.66□□□□□ -1.5
VPS38Q05919 UTR4YEL038W 684 nt5.66□□□□□ -1.5
VPS38Q05919 CBP4YGR174C 513 nt5.66□□□□□ -1.5
VPS38Q05919 YGR176WYGR176W 348 nt5.66□□□□□ -1.5
VPS38Q05919 GEP5YLR091W 882 nt5.66□□□□□ -1.5
VPS38Q05919 snR10snR10 245 nt5.66□□□□□ -1.5
VPS38Q05919 PRE2YPR103W 864 nt5.66□□□□□ -1.5
VPS38Q05919 DIT1YDR403W 1611 nt5.66□□□□□ -1.5
VPS38Q05919 ERG7YHR072W 2196 nt5.66□□□□□ -1.5
VPS38Q05919 ARB1YER036C 1833 nt5.65□□□□□ -1.5
VPS38Q05919 SRG1SRG1 551 nt5.65□□□□□ -1.5
VPS38Q05919 RTT103YDR289C 1230 nt5.65□□□□□ -1.5
VPS38Q05919 ERD1YDR414C 1089 nt5.65□□□□□ -1.5
VPS38Q05919 GTO1YGR154C 1071 nt5.65□□□□□ -1.5
VPS38Q05919 RRT7YLL030C 342 nt5.65□□□□□ -1.5
VPS38Q05919 DAL82YNL314W 768 nt5.65□□□□□ -1.5
VPS38Q05919 DCC1YCL016C 1143 nt5.65□□□□□ -1.5
VPS38Q05919 RTT106YNL206C 1368 nt5.65□□□□□ -1.51
VPS38Q05919 MRS3YJL133W 945 nt5.64□□□□□ -1.51
VPS38Q05919 PHA2YNL316C 1005 nt5.64□□□□□ -1.51
VPS38Q05919 CBC2YPL178W 627 nt5.64□□□□□ -1.51
VPS38Q05919 COA2YPL189C-A 207 nt5.64□□□□□ -1.51
VPS38Q05919 CST6YIL036W 1764 nt5.64□□□□□ -1.51
VPS38Q05919 TAH18YPR048W 1872 nt5.63□□□□□ -1.51
VPS38Q05919 SED4YCR067C 3198 nt5.63□□□□□ -1.51
VPS38Q05919 HMLALPHA1YCL066W 528 nt5.63□□□□□ -1.51
VPS38Q05919 MATALPHA1YCR040W 528 nt5.63□□□□□ -1.51
VPS38Q05919 YDL119CYDL119C 924 nt5.63□□□□□ -1.51
VPS38Q05919 GIR2YDR152W 798 nt5.63□□□□□ -1.51
VPS38Q05919 SRN2YLR119W 642 nt5.63□□□□□ -1.51
VPS38Q05919 SCP1YOR367W 603 nt5.63□□□□□ -1.51
VPS38Q05919 MCH4YOL119C 1506 nt5.63□□□□□ -1.51
VPS38Q05919 PDI1YCL043C 1569 nt5.63□□□□□ -1.51
VPS38Q05919 YPT32YGL210W 669 nt5.62□□□□□ -1.51
VPS38Q05919 IPI1YHR085W 1005 nt5.62□□□□□ -1.51
VPS38Q05919 YIR043CYIR043C 693 nt5.62□□□□□ -1.51
VPS38Q05919 PRP45YAL032C 1140 nt5.62□□□□□ -1.51
VPS38Q05919 SSP120YLR250W 705 nt5.62□□□□□ -1.51
VPS38Q05919 DCI1YOR180C 816 nt5.62□□□□□ -1.51
VPS38Q05919 COX11YPL132W 903 nt5.62□□□□□ -1.51
VPS38Q05919 ALG5YPL227C 1005 nt5.62□□□□□ -1.51
VPS38Q05919 NUD1YOR373W 2556 nt5.62□□□□□ -1.51
VPS38Q05919 YBR138CYBR138C 1575 nt5.62□□□□□ -1.51
VPS38Q05919 AVO1YOL078W 3531 nt5.62□□□□□ -1.51
VPS38Q05919 GPI18YBR004C 1302 nt5.61□□□□□ -1.51
VPS38Q05919 EIS1YMR031C 2532 nt5.6□□□□□ -1.51
VPS38Q05919 PRR1YKL116C 1557 nt5.6□□□□□ -1.51
VPS38Q05919 UPS3YDR185C 540 nt5.6□□□□□ -1.51
VPS38Q05919 YER187WYER187W 426 nt5.6□□□□□ -1.51
VPS38Q05919 TDH3YGR192C 999 nt5.6□□□□□ -1.51
VPS38Q05919 YJR115WYJR115W 510 nt5.6□□□□□ -1.51
VPS38Q05919 SEN34YAR008W 828 nt5.6□□□□□ -1.51
VPS38Q05919 YOL079WYOL079W 399 nt5.6□□□□□ -1.51
VPS38Q05919 TIP41YPR040W 1071 nt5.6□□□□□ -1.51
VPS38Q05919 PDB1YBR221C 1101 nt5.6□□□□□ -1.51
VPS38Q05919 GAL10YBR019C 2100 nt5.6□□□□□ -1.51
VPS38Q05919 CCZ1YBR131W 2115 nt5.6□□□□□ -1.51
VPS38Q05919 APM2YHL019C 1818 nt5.6□□□□□ -1.51
VPS38Q05919 MGS1YNL218W 1764 nt5.6□□□□□ -1.51
VPS38Q05919 URA7YBL039C 1740 nt5.6□□□□□ -1.51
VPS38Q05919 NOT3YIL038C 2511 nt5.59□□□□□ -1.51
VPS38Q05919 CDC19YAL038W 1503 nt5.59□□□□□ -1.51
VPS38Q05919 ICE2YIL090W 1476 nt5.59□□□□□ -1.51
VPS38Q05919 SIP5YMR140W 1470 nt5.59□□□□□ -1.51
VPS38Q05919 UGA1YGR019W 1416 nt5.59□□□□□ -1.51
VPS38Q05919 NAG1YGR031C-A 492 nt5.59□□□□□ -1.51
VPS38Q05919 APN1YKL114C 1104 nt5.59□□□□□ -1.51
VPS38Q05919 YMR135W-AYMR135W-A 534 nt5.59□□□□□ -1.51
VPS38Q05919 SEC17YBL050W 879 nt5.59□□□□□ -1.51
VPS38Q05919 KTR3YBR205W 1215 nt5.59□□□□□ -1.51
VPS38Q05919 NOP2YNL061W 1857 nt5.58□□□□□ -1.52
VPS38Q05919 AAD4YDL243C 990 nt5.58□□□□□ -1.52
VPS38Q05919 SUA5YGL169W 1281 nt5.58□□□□□ -1.52
VPS38Q05919 MTF1YMR228W 1026 nt5.58□□□□□ -1.52
VPS38Q05919 YBR056C-BYBR056C-B 159 nt5.58□□□□□ -1.52
VPS38Q05919 PEX32YBR168W 1242 nt5.58□□□□□ -1.52
VPS38Q05919 AVT3YKL146W 2079 nt5.58□□□□□ -1.52
VPS38Q05919 GRS1YBR121C 2004 nt5.58□□□□□ -1.52
VPS38Q05919 WHI4YDL224C 1950 nt5.58□□□□□ -1.52
VPS38Q05919 COQ6YGR255C 1440 nt5.57□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms