Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL20P78556 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCL20P78556 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CCL20P78556 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL20P78556 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.31■□□□□ 0.52
CCL20P78556 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCL20P78556 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL20P78556 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL20P78556 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCL20P78556 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL20P78556 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCL20P78556 GUSBP5-202ENST00000510805 1989 ntBASIC18.31■□□□□ 0.52
CCL20P78556 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.31■□□□□ 0.52
CCL20P78556 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL20P78556 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCL20P78556 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL20P78556 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.3■□□□□ 0.52
CCL20P78556 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL20P78556 AC127496.7-201ENST00000625110 1798 ntBASIC18.3■□□□□ 0.52
CCL20P78556 SLC25A24-204ENST00000569674 2357 ntBASIC18.3■□□□□ 0.52
CCL20P78556 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCL20P78556 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL20P78556 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL20P78556 AC136428.2-201ENST00000563187 214 ntBASIC18.3■□□□□ 0.52
CCL20P78556 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL20P78556 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL20P78556 AL137060.1-201ENST00000618151 2648 ntBASIC18.3■□□□□ 0.52
CCL20P78556 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.3■□□□□ 0.52
CCL20P78556 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL20P78556 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL20P78556 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL20P78556 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCL20P78556 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CCL20P78556 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.29■□□□□ 0.52
CCL20P78556 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL20P78556 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.29■□□□□ 0.52
CCL20P78556 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
CCL20P78556 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCL20P78556 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCL20P78556 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL20P78556 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL20P78556 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL20P78556 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL20P78556 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CCL20P78556 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.28■□□□□ 0.52
CCL20P78556 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCL20P78556 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCL20P78556 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL20P78556 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL20P78556 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCL20P78556 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCL20P78556 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL20P78556 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL20P78556 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.28■□□□□ 0.52
CCL20P78556 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL20P78556 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.28■□□□□ 0.52
CCL20P78556 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL20P78556 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.28■□□□□ 0.52
CCL20P78556 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL20P78556 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
CCL20P78556 AL359504.2-201ENST00000605506 1601 ntBASIC18.27■□□□□ 0.52
CCL20P78556 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL20P78556 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL20P78556 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCL20P78556 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CCL20P78556 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL20P78556 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL20P78556 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.27■□□□□ 0.51
CCL20P78556 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCL20P78556 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.26■□□□□ 0.51
CCL20P78556 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL20P78556 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL20P78556 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL20P78556 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCL20P78556 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCL20P78556 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL20P78556 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.26■□□□□ 0.51
CCL20P78556 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL20P78556 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL20P78556 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.26■□□□□ 0.51
CCL20P78556 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CCL20P78556 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL20P78556 HLA-L-211ENST00000482052 1765 ntBASIC18.25■□□□□ 0.51
CCL20P78556 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL20P78556 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCL20P78556 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.25■□□□□ 0.51
CCL20P78556 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL20P78556 MIR6089-201ENST00000616698 64 ntBASIC18.25■□□□□ 0.51
CCL20P78556 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCL20P78556 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL20P78556 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCL20P78556 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL20P78556 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCL20P78556 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CCL20P78556 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCL20P78556 ECEL1P1-201ENST00000373592 1742 ntBASIC18.24■□□□□ 0.51
CCL20P78556 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL20P78556 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCL20P78556 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL20P78556 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms