Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.87■□□□□ 0.93
LSM3P62310 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSM3P62310 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.87■□□□□ 0.93
LSM3P62310 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSM3P62310 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSM3P62310 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LSM3P62310 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LSM3P62310 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSM3P62310 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSM3P62310 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.87■□□□□ 0.93
LSM3P62310 AC007375.3-201ENST00000600936 2314 ntBASIC20.87■□□□□ 0.93
LSM3P62310 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LSM3P62310 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
LSM3P62310 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
LSM3P62310 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.86■□□□□ 0.93
LSM3P62310 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.86■□□□□ 0.93
LSM3P62310 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LSM3P62310 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LSM3P62310 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
LSM3P62310 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSM3P62310 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.85■□□□□ 0.93
LSM3P62310 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LSM3P62310 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSM3P62310 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSM3P62310 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSM3P62310 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.85■□□□□ 0.93
LSM3P62310 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSM3P62310 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSM3P62310 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.84■□□□□ 0.93
LSM3P62310 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSM3P62310 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LSM3P62310 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSM3P62310 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
LSM3P62310 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
LSM3P62310 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSM3P62310 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.84■□□□□ 0.93
LSM3P62310 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.84■□□□□ 0.93
LSM3P62310 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSM3P62310 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.84■□□□□ 0.93
LSM3P62310 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LSM3P62310 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LSM3P62310 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.83■□□□□ 0.93
LSM3P62310 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LSM3P62310 C1orf229-201ENST00000623686 2258 ntBASIC20.83■□□□□ 0.93
LSM3P62310 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LSM3P62310 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.83■□□□□ 0.93
LSM3P62310 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
LSM3P62310 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.83■□□□□ 0.92
LSM3P62310 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LSM3P62310 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LSM3P62310 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.83■□□□□ 0.92
LSM3P62310 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
LSM3P62310 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.83■□□□□ 0.92
LSM3P62310 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSM3P62310 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSM3P62310 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LSM3P62310 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LSM3P62310 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.82■□□□□ 0.92
LSM3P62310 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.82■□□□□ 0.92
LSM3P62310 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LSM3P62310 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LSM3P62310 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
LSM3P62310 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LSM3P62310 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LSM3P62310 AL359504.2-201ENST00000605506 1601 ntBASIC20.81■□□□□ 0.92
LSM3P62310 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LSM3P62310 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.81■□□□□ 0.92
LSM3P62310 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.81■□□□□ 0.92
LSM3P62310 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSM3P62310 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSM3P62310 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSM3P62310 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.8■□□□□ 0.92
LSM3P62310 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSM3P62310 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSM3P62310 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LSM3P62310 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.8■□□□□ 0.92
LSM3P62310 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.8■□□□□ 0.92
LSM3P62310 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LSM3P62310 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSM3P62310 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSM3P62310 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LSM3P62310 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSM3P62310 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSM3P62310 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSM3P62310 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LSM3P62310 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
LSM3P62310 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LSM3P62310 LINC00526-201ENST00000581067 1875 ntBASIC20.79■□□□□ 0.92
LSM3P62310 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LSM3P62310 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LSM3P62310 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LSM3P62310 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LSM3P62310 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.79■□□□□ 0.92
LSM3P62310 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LSM3P62310 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.79■□□□□ 0.92
LSM3P62310 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LSM3P62310 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
LSM3P62310 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LSM3P62310 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.78■□□□□ 0.92
LSM3P62310 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms