Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Xcl1P47993 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Xcl1P47993 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Xcl1P47993 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Xcl1P47993 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Xcl1P47993 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Xcl1P47993 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Xcl1P47993 Golph3-202ENSMUST00000226517 2359 ntBASIC13.73□□□□□ -0.21
Xcl1P47993 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Xcl1P47993 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Xcl1P47993 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Xcl1P47993 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Xcl1P47993 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Xcl1P47993 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Xcl1P47993 Gm4419-202ENSMUST00000226239 1431 ntBASIC13.73□□□□□ -0.21
Xcl1P47993 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Xcl1P47993 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Xcl1P47993 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Xcl1P47993 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Xcl1P47993 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Xcl1P47993 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Xcl1P47993 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Xcl1P47993 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Xcl1P47993 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Xcl1P47993 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Xcl1P47993 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Xcl1P47993 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Xcl1P47993 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Xcl1P47993 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Xcl1P47993 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Xcl1P47993 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC13.71□□□□□ -0.21
Xcl1P47993 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Xcl1P47993 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Xcl1P47993 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Xcl1P47993 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.7□□□□□ -0.22
Xcl1P47993 Peli2-204ENSMUST00000226513 1320 ntBASIC13.7□□□□□ -0.22
Xcl1P47993 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Xcl1P47993 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Xcl1P47993 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Xcl1P47993 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Xcl1P47993 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Xcl1P47993 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Xcl1P47993 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Xcl1P47993 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Xcl1P47993 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Xcl1P47993 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Xcl1P47993 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Xcl1P47993 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Xcl1P47993 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Xcl1P47993 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Xcl1P47993 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Xcl1P47993 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Xcl1P47993 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Xcl1P47993 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Xcl1P47993 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Xcl1P47993 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Xcl1P47993 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Xcl1P47993 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Xcl1P47993 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Xcl1P47993 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.69□□□□□ -0.22
Xcl1P47993 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Xcl1P47993 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Xcl1P47993 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Xcl1P47993 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Xcl1P47993 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Xcl1P47993 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Xcl1P47993 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Xcl1P47993 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Xcl1P47993 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Xcl1P47993 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Xcl1P47993 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Xcl1P47993 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Xcl1P47993 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Xcl1P47993 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Xcl1P47993 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Xcl1P47993 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Xcl1P47993 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Xcl1P47993 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Xcl1P47993 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Xcl1P47993 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Xcl1P47993 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Xcl1P47993 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Xcl1P47993 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Xcl1P47993 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Xcl1P47993 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Xcl1P47993 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Xcl1P47993 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Xcl1P47993 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Xcl1P47993 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Xcl1P47993 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Xcl1P47993 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Xcl1P47993 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Xcl1P47993 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Xcl1P47993 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Xcl1P47993 AC115037.1-201ENSMUST00000223391 2173 ntBASIC13.65□□□□□ -0.22
Xcl1P47993 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Xcl1P47993 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Xcl1P47993 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Xcl1P47993 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Xcl1P47993 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms