Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.31■□□□□ 0.52
RBFOX3A6NFN3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RBFOX3A6NFN3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RBFOX3A6NFN3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RBFOX3A6NFN3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RBFOX3A6NFN3 AC108673.1-201ENST00000510422 1159 ntBASIC18.31■□□□□ 0.52
RBFOX3A6NFN3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RBFOX3A6NFN3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RBFOX3A6NFN3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RBFOX3A6NFN3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RBFOX3A6NFN3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RBFOX3A6NFN3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RBFOX3A6NFN3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RBFOX3A6NFN3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RBFOX3A6NFN3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RBFOX3A6NFN3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RBFOX3A6NFN3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RBFOX3A6NFN3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.3■□□□□ 0.52
RBFOX3A6NFN3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.3■□□□□ 0.52
RBFOX3A6NFN3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.3■□□□□ 0.52
RBFOX3A6NFN3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.3■□□□□ 0.52
RBFOX3A6NFN3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
RBFOX3A6NFN3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RBFOX3A6NFN3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.3■□□□□ 0.52
RBFOX3A6NFN3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RBFOX3A6NFN3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RBFOX3A6NFN3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RBFOX3A6NFN3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RBFOX3A6NFN3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.29■□□□□ 0.52
RBFOX3A6NFN3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBFOX3A6NFN3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RBFOX3A6NFN3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBFOX3A6NFN3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBFOX3A6NFN3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBFOX3A6NFN3 FOXO3B-201ENST00000395675 1928 ntBASIC18.29■□□□□ 0.52
RBFOX3A6NFN3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RBFOX3A6NFN3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RBFOX3A6NFN3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RBFOX3A6NFN3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.28■□□□□ 0.52
RBFOX3A6NFN3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RBFOX3A6NFN3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RBFOX3A6NFN3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RBFOX3A6NFN3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RBFOX3A6NFN3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
RBFOX3A6NFN3 ECEL1P1-201ENST00000373592 1742 ntBASIC18.28■□□□□ 0.52
RBFOX3A6NFN3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RBFOX3A6NFN3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
RBFOX3A6NFN3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RBFOX3A6NFN3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.28■□□□□ 0.52
RBFOX3A6NFN3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RBFOX3A6NFN3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RBFOX3A6NFN3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RBFOX3A6NFN3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RBFOX3A6NFN3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RBFOX3A6NFN3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RBFOX3A6NFN3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RBFOX3A6NFN3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RBFOX3A6NFN3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.27■□□□□ 0.51
RBFOX3A6NFN3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RBFOX3A6NFN3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
RBFOX3A6NFN3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RBFOX3A6NFN3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RBFOX3A6NFN3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.26■□□□□ 0.51
RBFOX3A6NFN3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RBFOX3A6NFN3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RBFOX3A6NFN3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RBFOX3A6NFN3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.26■□□□□ 0.51
RBFOX3A6NFN3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.26■□□□□ 0.51
RBFOX3A6NFN3 CAHM-201ENST00000604200 896 ntBASIC18.26■□□□□ 0.51
RBFOX3A6NFN3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RBFOX3A6NFN3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RBFOX3A6NFN3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RBFOX3A6NFN3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RBFOX3A6NFN3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.26■□□□□ 0.51
RBFOX3A6NFN3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RBFOX3A6NFN3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RBFOX3A6NFN3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RBFOX3A6NFN3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RBFOX3A6NFN3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RBFOX3A6NFN3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RBFOX3A6NFN3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RBFOX3A6NFN3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RBFOX3A6NFN3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RBFOX3A6NFN3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RBFOX3A6NFN3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RBFOX3A6NFN3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RBFOX3A6NFN3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.25■□□□□ 0.51
RBFOX3A6NFN3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RBFOX3A6NFN3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RBFOX3A6NFN3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RBFOX3A6NFN3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RBFOX3A6NFN3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RBFOX3A6NFN3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.24■□□□□ 0.51
RBFOX3A6NFN3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.24■□□□□ 0.51
RBFOX3A6NFN3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RBFOX3A6NFN3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RBFOX3A6NFN3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.24■□□□□ 0.51
RBFOX3A6NFN3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RBFOX3A6NFN3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
RBFOX3A6NFN3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms