Protein–RNA interactions for Protein: A0A0C4DH26

IGKV6D-41, Immunoglobulin kappa variable 6D-41 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV6D-41A0A0C4DH26 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC27.24■■□□□ 1.95
IGKV6D-41A0A0C4DH26 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC27.24■■□□□ 1.95
IGKV6D-41A0A0C4DH26 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
IGKV6D-41A0A0C4DH26 MIR6722-201ENST00000617286 78 ntBASIC27.23■■□□□ 1.95
IGKV6D-41A0A0C4DH26 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC27.23■■□□□ 1.95
IGKV6D-41A0A0C4DH26 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
IGKV6D-41A0A0C4DH26 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
IGKV6D-41A0A0C4DH26 MIR3621-201ENST00000580529 85 ntBASIC27.22■■□□□ 1.95
IGKV6D-41A0A0C4DH26 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC27.22■■□□□ 1.95
IGKV6D-41A0A0C4DH26 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC27.22■■□□□ 1.95
IGKV6D-41A0A0C4DH26 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
IGKV6D-41A0A0C4DH26 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC27.22■■□□□ 1.95
IGKV6D-41A0A0C4DH26 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.21■■□□□ 1.95
IGKV6D-41A0A0C4DH26 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
IGKV6D-41A0A0C4DH26 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
IGKV6D-41A0A0C4DH26 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
IGKV6D-41A0A0C4DH26 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC27.2■■□□□ 1.95
IGKV6D-41A0A0C4DH26 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC27.2■■□□□ 1.95
IGKV6D-41A0A0C4DH26 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
IGKV6D-41A0A0C4DH26 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
IGKV6D-41A0A0C4DH26 CD72-202ENST00000378430 585 ntTSL 3 BASIC27.2■■□□□ 1.94
IGKV6D-41A0A0C4DH26 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.2■■□□□ 1.94
IGKV6D-41A0A0C4DH26 AC004448.1-201ENST00000458332 883 ntBASIC27.2■■□□□ 1.94
IGKV6D-41A0A0C4DH26 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
IGKV6D-41A0A0C4DH26 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
IGKV6D-41A0A0C4DH26 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
IGKV6D-41A0A0C4DH26 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC27.2■■□□□ 1.94
IGKV6D-41A0A0C4DH26 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC27.19■■□□□ 1.94
IGKV6D-41A0A0C4DH26 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC27.19■■□□□ 1.94
IGKV6D-41A0A0C4DH26 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
IGKV6D-41A0A0C4DH26 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
IGKV6D-41A0A0C4DH26 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
IGKV6D-41A0A0C4DH26 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
IGKV6D-41A0A0C4DH26 AC131274.2-201ENST00000580697 1507 ntBASIC27.19■■□□□ 1.94
IGKV6D-41A0A0C4DH26 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
IGKV6D-41A0A0C4DH26 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
IGKV6D-41A0A0C4DH26 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC27.18■■□□□ 1.94
IGKV6D-41A0A0C4DH26 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.18■■□□□ 1.94
IGKV6D-41A0A0C4DH26 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
IGKV6D-41A0A0C4DH26 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.18■■□□□ 1.94
IGKV6D-41A0A0C4DH26 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
IGKV6D-41A0A0C4DH26 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
IGKV6D-41A0A0C4DH26 AC131281.2-201ENST00000520478 145 ntBASIC27.17■■□□□ 1.94
IGKV6D-41A0A0C4DH26 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC27.17■■□□□ 1.94
IGKV6D-41A0A0C4DH26 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
IGKV6D-41A0A0C4DH26 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
IGKV6D-41A0A0C4DH26 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
IGKV6D-41A0A0C4DH26 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
IGKV6D-41A0A0C4DH26 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC27.16■■□□□ 1.94
IGKV6D-41A0A0C4DH26 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC27.16■■□□□ 1.94
IGKV6D-41A0A0C4DH26 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC27.16■■□□□ 1.94
IGKV6D-41A0A0C4DH26 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.16■■□□□ 1.94
IGKV6D-41A0A0C4DH26 LSM7-203ENST00000585409 512 ntTSL 2 BASIC27.16■■□□□ 1.94
IGKV6D-41A0A0C4DH26 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC27.16■■□□□ 1.94
IGKV6D-41A0A0C4DH26 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC27.16■■□□□ 1.94
IGKV6D-41A0A0C4DH26 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
IGKV6D-41A0A0C4DH26 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
IGKV6D-41A0A0C4DH26 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
IGKV6D-41A0A0C4DH26 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.15■■□□□ 1.94
IGKV6D-41A0A0C4DH26 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC27.15■■□□□ 1.94
IGKV6D-41A0A0C4DH26 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
IGKV6D-41A0A0C4DH26 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC27.14■■□□□ 1.94
IGKV6D-41A0A0C4DH26 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
IGKV6D-41A0A0C4DH26 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC27.14■■□□□ 1.94
IGKV6D-41A0A0C4DH26 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC27.14■■□□□ 1.94
IGKV6D-41A0A0C4DH26 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27.14■■□□□ 1.94
IGKV6D-41A0A0C4DH26 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.14■■□□□ 1.94
IGKV6D-41A0A0C4DH26 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.14■■□□□ 1.94
IGKV6D-41A0A0C4DH26 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.14■■□□□ 1.94
IGKV6D-41A0A0C4DH26 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.14■■□□□ 1.93
IGKV6D-41A0A0C4DH26 AC008406.3-201ENST00000620001 1374 ntBASIC27.13■■□□□ 1.93
IGKV6D-41A0A0C4DH26 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
IGKV6D-41A0A0C4DH26 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
IGKV6D-41A0A0C4DH26 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
IGKV6D-41A0A0C4DH26 TFPT-201ENST00000391757 774 ntTSL 5 BASIC27.13■■□□□ 1.93
IGKV6D-41A0A0C4DH26 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
IGKV6D-41A0A0C4DH26 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
IGKV6D-41A0A0C4DH26 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.13■■□□□ 1.93
IGKV6D-41A0A0C4DH26 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
IGKV6D-41A0A0C4DH26 PEMT-206ENST00000435340 960 ntTSL 5 BASIC27.12■■□□□ 1.93
IGKV6D-41A0A0C4DH26 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC27.12■■□□□ 1.93
IGKV6D-41A0A0C4DH26 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
IGKV6D-41A0A0C4DH26 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
IGKV6D-41A0A0C4DH26 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
IGKV6D-41A0A0C4DH26 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.11■■□□□ 1.93
IGKV6D-41A0A0C4DH26 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
IGKV6D-41A0A0C4DH26 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.11■■□□□ 1.93
IGKV6D-41A0A0C4DH26 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC27.11■■□□□ 1.93
IGKV6D-41A0A0C4DH26 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.11■■□□□ 1.93
IGKV6D-41A0A0C4DH26 AL512631.2-201ENST00000604634 923 ntBASIC27.11■■□□□ 1.93
IGKV6D-41A0A0C4DH26 RASSF1-AS1-201ENST00000629828 790 ntBASIC27.11■■□□□ 1.93
IGKV6D-41A0A0C4DH26 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
IGKV6D-41A0A0C4DH26 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.11■■□□□ 1.93
IGKV6D-41A0A0C4DH26 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC27.11■■□□□ 1.93
IGKV6D-41A0A0C4DH26 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC27.1■■□□□ 1.93
IGKV6D-41A0A0C4DH26 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC27.1■■□□□ 1.93
IGKV6D-41A0A0C4DH26 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
IGKV6D-41A0A0C4DH26 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.1■■□□□ 1.93
IGKV6D-41A0A0C4DH26 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC27.1■■□□□ 1.93
IGKV6D-41A0A0C4DH26 AL356740.2-201ENST00000601559 647 ntBASIC27.1■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms