Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV9-1A0A075B6T8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRAV9-1A0A075B6T8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV9-1A0A075B6T8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV9-1A0A075B6T8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV9-1A0A075B6T8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV9-1A0A075B6T8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV9-1A0A075B6T8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAV9-1A0A075B6T8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV9-1A0A075B6T8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TRAV9-1A0A075B6T8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC17.47■□□□□ 0.39
TRAV9-1A0A075B6T8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV9-1A0A075B6T8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV9-1A0A075B6T8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
TRAV9-1A0A075B6T8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV9-1A0A075B6T8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
TRAV9-1A0A075B6T8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV9-1A0A075B6T8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV9-1A0A075B6T8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV9-1A0A075B6T8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV9-1A0A075B6T8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV9-1A0A075B6T8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRAV9-1A0A075B6T8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV9-1A0A075B6T8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAV9-1A0A075B6T8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV9-1A0A075B6T8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV9-1A0A075B6T8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV9-1A0A075B6T8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAV9-1A0A075B6T8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRAV9-1A0A075B6T8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
TRAV9-1A0A075B6T8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV9-1A0A075B6T8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV9-1A0A075B6T8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV9-1A0A075B6T8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV9-1A0A075B6T8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV9-1A0A075B6T8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV9-1A0A075B6T8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV9-1A0A075B6T8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV9-1A0A075B6T8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV9-1A0A075B6T8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV9-1A0A075B6T8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV9-1A0A075B6T8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRAV9-1A0A075B6T8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV9-1A0A075B6T8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV9-1A0A075B6T8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TRAV9-1A0A075B6T8 AL121603.2-201ENST00000557373 2117 ntBASIC17.44■□□□□ 0.38
TRAV9-1A0A075B6T8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV9-1A0A075B6T8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV9-1A0A075B6T8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV9-1A0A075B6T8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TRAV9-1A0A075B6T8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRAV9-1A0A075B6T8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV9-1A0A075B6T8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV9-1A0A075B6T8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV9-1A0A075B6T8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV9-1A0A075B6T8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.43■□□□□ 0.38
TRAV9-1A0A075B6T8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRAV9-1A0A075B6T8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV9-1A0A075B6T8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV9-1A0A075B6T8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TRAV9-1A0A075B6T8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV9-1A0A075B6T8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC17.43■□□□□ 0.38
TRAV9-1A0A075B6T8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV9-1A0A075B6T8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV9-1A0A075B6T8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRAV9-1A0A075B6T8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV9-1A0A075B6T8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRAV9-1A0A075B6T8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRAV9-1A0A075B6T8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV9-1A0A075B6T8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV9-1A0A075B6T8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV9-1A0A075B6T8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV9-1A0A075B6T8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV9-1A0A075B6T8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV9-1A0A075B6T8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRAV9-1A0A075B6T8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV9-1A0A075B6T8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV9-1A0A075B6T8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV9-1A0A075B6T8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV9-1A0A075B6T8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRAV9-1A0A075B6T8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.41■□□□□ 0.38
TRAV9-1A0A075B6T8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV9-1A0A075B6T8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV9-1A0A075B6T8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV9-1A0A075B6T8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV9-1A0A075B6T8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV9-1A0A075B6T8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV9-1A0A075B6T8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV9-1A0A075B6T8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV9-1A0A075B6T8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV9-1A0A075B6T8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV9-1A0A075B6T8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV9-1A0A075B6T8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRAV9-1A0A075B6T8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV9-1A0A075B6T8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV9-1A0A075B6T8 AC108673.1-201ENST00000510422 1159 ntBASIC17.4■□□□□ 0.38
TRAV9-1A0A075B6T8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV9-1A0A075B6T8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV9-1A0A075B6T8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV9-1A0A075B6T8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms