Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 U82695.1-201ENST00000635752 1889 ntBASIC15.02■□□□□ -0
AP4B1Q9Y6B7 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 AL355306.1-201ENST00000415580 579 ntBASIC15.02■□□□□ -0
AP4B1Q9Y6B7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 AC055717.3-201ENST00000622967 595 ntBASIC15.02■□□□□ -0
AP4B1Q9Y6B7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 AC134684.3-201ENST00000641758 218 ntBASIC15.02■□□□□ -0
AP4B1Q9Y6B7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
AP4B1Q9Y6B7 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP4B1Q9Y6B7 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
AP4B1Q9Y6B7 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
AP4B1Q9Y6B7 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP4B1Q9Y6B7 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP4B1Q9Y6B7 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP4B1Q9Y6B7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP4B1Q9Y6B7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.02□□□□□ -0.01
AP4B1Q9Y6B7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.02□□□□□ -0.01
AP4B1Q9Y6B7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP4B1Q9Y6B7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
AP4B1Q9Y6B7 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.02□□□□□ -0.01
AP4B1Q9Y6B7 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP4B1Q9Y6B7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP4B1Q9Y6B7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.02□□□□□ -0.01
AP4B1Q9Y6B7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 WASH6P-202ENST00000359512 1437 ntBASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 AP006288.1-201ENST00000446065 395 ntBASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 RN7SL589P-201ENST00000481268 310 ntBASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 AL691403.2-201ENST00000618460 490 ntBASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP4B1Q9Y6B7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms