Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 AC004987.2-201ENST00000395959 1148 ntBASIC14.75□□□□□ -0.05
AP4S1Q9Y587 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 RPL5P21-201ENST00000404620 815 ntBASIC14.75□□□□□ -0.05
AP4S1Q9Y587 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 FOSL1P1-201ENST00000511041 816 ntBASIC14.75□□□□□ -0.05
AP4S1Q9Y587 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 AL009183.1-201ENST00000603760 355 ntBASIC14.75□□□□□ -0.05
AP4S1Q9Y587 AC092119.3-201ENST00000612618 583 ntBASIC14.75□□□□□ -0.05
AP4S1Q9Y587 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 AL359881.3-201ENST00000602640 1721 ntBASIC14.75□□□□□ -0.05
AP4S1Q9Y587 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
AP4S1Q9Y587 AC107918.4-201ENST00000641966 3141 ntBASIC14.75□□□□□ -0.05
AP4S1Q9Y587 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 CICP11-201ENST00000434745 2827 ntBASIC14.74□□□□□ -0.05
AP4S1Q9Y587 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 AC004790.2-201ENST00000623588 572 ntBASIC14.74□□□□□ -0.05
AP4S1Q9Y587 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP4S1Q9Y587 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
AP4S1Q9Y587 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms