Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 AC006486.2-201ENST00000624246 2199 ntBASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 AL391825.1-201ENST00000457671 1364 ntBASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 AL353779.1-201ENST00000434793 351 ntBASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 VDAC1P7-201ENST00000462417 847 ntBASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 ELK1P1-201ENST00000485699 580 ntBASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
DTX4Q9Y2E6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 AC148477.4-201ENST00000613430 1793 ntBASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 MYCLP2-201ENST00000449268 967 ntBASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 AC140912.1-201ENST00000577171 1054 ntBASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 SPDYE22P-201ENST00000582158 798 ntBASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 CTBP2P3-201ENST00000585629 1255 ntBASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 BRI3BPP1-201ENST00000594224 787 ntBASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DTX4Q9Y2E6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms