Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 CTBP2P5-201ENST00000454986 1264 ntBASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 BX539320.1-201ENST00000623759 877 ntBASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 DOC2GP-204ENST00000639052 2548 ntBASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB1BQ9H0U4 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
RAB1BQ9H0U4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
RAB1BQ9H0U4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.15□□□□□ -0.31
RAB1BQ9H0U4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RAB1BQ9H0U4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
RAB1BQ9H0U4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 PDIA3P1-201ENST00000471856 1510 ntBASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 PCDHA3-202ENST00000532566 4594 ntBASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 AC112504.1-201ENST00000623415 1841 ntBASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 NUS1P3-201ENST00000423502 862 ntBASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 AC007551.1-201ENST00000457394 519 ntBASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 AC079316.1-201ENST00000548397 411 ntBASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 AP005019.2-201ENST00000615104 511 ntBASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 AL138799.1-201ENST00000448213 1675 ntBASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB1BQ9H0U4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB1BQ9H0U4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB1BQ9H0U4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
RAB1BQ9H0U4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB1BQ9H0U4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB1BQ9H0U4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB1BQ9H0U4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB1BQ9H0U4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB1BQ9H0U4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB1BQ9H0U4 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB1BQ9H0U4 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB1BQ9H0U4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB1BQ9H0U4 AP003680.1-201ENST00000598970 3660 ntBASIC13.13□□□□□ -0.31
RAB1BQ9H0U4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB1BQ9H0U4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms