Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 AC009090.5-201ENST00000624886 2285 ntBASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 ALG1L8P-201ENST00000533887 760 ntBASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 AC018529.1-201ENST00000613063 361 ntBASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 AC007191.1-201ENST00000623179 2995 ntBASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 LINC00552-201ENST00000625151 2579 ntBASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 AL035456.1-201ENST00000456064 1369 ntBASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 AGAP7P-201ENST00000582299 2062 ntBASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 AGAP14-201ENST00000624701 2060 ntBASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.43□□□□□ -0.1
POLR2J2Q9GZM3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 AZGP1P1-201ENST00000411909 902 ntBASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 DNAJB3-201ENST00000446806 729 ntBASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 AC105021.1-202ENST00000570572 669 ntBASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 AC022145.2-201ENST00000598203 171 ntBASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 AC105339.1-204ENST00000636249 355 ntBASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
POLR2J2Q9GZM3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms