Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 KRT90P-201ENST00000549264 1064 ntBASIC16.52■□□□□ 0.24
RNF135Q8IUD6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 AC124283.3-201ENST00000570869 594 ntBASIC16.52■□□□□ 0.24
RNF135Q8IUD6 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF135Q8IUD6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RNF135Q8IUD6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF135Q8IUD6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RNF135Q8IUD6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF135Q8IUD6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF135Q8IUD6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
RNF135Q8IUD6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RNF135Q8IUD6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.52■□□□□ 0.23
RNF135Q8IUD6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF135Q8IUD6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RNF135Q8IUD6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.51■□□□□ 0.23
RNF135Q8IUD6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 AC012441.1-201ENST00000446669 685 ntBASIC16.51■□□□□ 0.23
RNF135Q8IUD6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 UPF3AP2-201ENST00000457924 1132 ntBASIC16.51■□□□□ 0.23
RNF135Q8IUD6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 MIR4706-201ENST00000582134 82 ntBASIC16.51■□□□□ 0.23
RNF135Q8IUD6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF135Q8IUD6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 AC005077.2-201ENST00000449786 690 ntBASIC16.5■□□□□ 0.23
RNF135Q8IUD6 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 EIF4HP1-201ENST00000453115 687 ntBASIC16.5■□□□□ 0.23
RNF135Q8IUD6 LDHBP1-201ENST00000455730 1119 ntBASIC16.5■□□□□ 0.23
RNF135Q8IUD6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 AC106760.1-201ENST00000508690 800 ntBASIC16.5■□□□□ 0.23
RNF135Q8IUD6 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 AL049840.4-201ENST00000602422 811 ntBASIC16.5■□□□□ 0.23
RNF135Q8IUD6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 AL008638.5-201ENST00000623814 1298 ntBASIC16.5■□□□□ 0.23
RNF135Q8IUD6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 CYP4F24P-201ENST00000586049 1580 ntBASIC16.5■□□□□ 0.23
RNF135Q8IUD6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms