Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 AC007292.2-201ENST00000593524 1812 ntBASIC16.35■□□□□ 0.21
RNF43Q68DV7 SLC7A15P-201ENST00000424028 1363 ntBASIC16.35■□□□□ 0.21
RNF43Q68DV7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
RNF43Q68DV7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF43Q68DV7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RNF43Q68DV7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 SNX18-202ENST00000343017 3140 ntBASIC16.34■□□□□ 0.21
RNF43Q68DV7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF43Q68DV7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.34■□□□□ 0.21
RNF43Q68DV7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF43Q68DV7 HNRNPUP1-201ENST00000554987 333 ntBASIC16.34■□□□□ 0.21
RNF43Q68DV7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF43Q68DV7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF43Q68DV7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.34■□□□□ 0.21
RNF43Q68DV7 AC097359.3-201ENST00000603982 1210 ntBASIC16.34■□□□□ 0.21
RNF43Q68DV7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF43Q68DV7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF43Q68DV7 AC011477.6-201ENST00000604980 1927 ntBASIC16.34■□□□□ 0.21
RNF43Q68DV7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 AC134407.2-201ENST00000625089 1978 ntBASIC16.34■□□□□ 0.21
RNF43Q68DV7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF43Q68DV7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RNF43Q68DV7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF43Q68DV7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF43Q68DV7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF43Q68DV7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.33■□□□□ 0.21
RNF43Q68DV7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RNF43Q68DV7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF43Q68DV7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF43Q68DV7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.33■□□□□ 0.21
RNF43Q68DV7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RNF43Q68DV7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.33■□□□□ 0.21
RNF43Q68DV7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.33■□□□□ 0.21
RNF43Q68DV7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RNF43Q68DV7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF43Q68DV7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF43Q68DV7 SPDYE19P-201ENST00000338590 713 ntBASIC16.33■□□□□ 0.2
RNF43Q68DV7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF43Q68DV7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF43Q68DV7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNF43Q68DV7 TARDBPP1-201ENST00000442013 1203 ntBASIC16.33■□□□□ 0.2
RNF43Q68DV7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF43Q68DV7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF43Q68DV7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF43Q68DV7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF43Q68DV7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF43Q68DV7 AC008494.3-201ENST00000606615 944 ntBASIC16.33■□□□□ 0.2
RNF43Q68DV7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF43Q68DV7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF43Q68DV7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RNF43Q68DV7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF43Q68DV7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF43Q68DV7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF43Q68DV7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF43Q68DV7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RNF43Q68DV7 AC026748.1-201ENST00000624349 3251 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms