Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC126755.1-201ENST00000525846 6405 ntBASIC18.6■□□□□ 0.57
RNF20Q5VTR2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 TSSK5P-201ENST00000423978 907 ntBASIC18.59■□□□□ 0.57
RNF20Q5VTR2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 AC055876.3-201ENST00000431496 288 ntBASIC18.59■□□□□ 0.57
RNF20Q5VTR2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 AC138649.4-201ENST00000612222 287 ntBASIC18.59■□□□□ 0.57
RNF20Q5VTR2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 AL121723.1-201ENST00000445194 1519 ntBASIC18.59■□□□□ 0.57
RNF20Q5VTR2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RNF20Q5VTR2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF20Q5VTR2 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF20Q5VTR2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.58■□□□□ 0.57
RNF20Q5VTR2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
RNF20Q5VTR2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.58■□□□□ 0.57
RNF20Q5VTR2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF20Q5VTR2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RNF20Q5VTR2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.58■□□□□ 0.57
RNF20Q5VTR2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF20Q5VTR2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RNF20Q5VTR2 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 AC114501.2-201ENST00000439631 535 ntBASIC18.58■□□□□ 0.56
RNF20Q5VTR2 AC009477.1-201ENST00000452936 217 ntBASIC18.58■□□□□ 0.56
RNF20Q5VTR2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 AL390754.1-201ENST00000619088 582 ntBASIC18.58■□□□□ 0.56
RNF20Q5VTR2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 TCAF2P1-201ENST00000291129 2421 ntBASIC18.58■□□□□ 0.56
RNF20Q5VTR2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF20Q5VTR2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 MIR600HG-201ENST00000449175 5984 ntBASIC18.57■□□□□ 0.56
RNF20Q5VTR2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 AC091951.1-201ENST00000512854 2465 ntBASIC18.57■□□□□ 0.56
RNF20Q5VTR2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF20Q5VTR2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms