Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 CAP2P1-201ENST00000557743 1390 ntBASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 TLE1P1-201ENST00000422965 589 ntBASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 FAM58BP-201ENST00000439056 645 ntBASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 RN7SL67P-201ENST00000492147 296 ntBASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 RN7SL163P-201ENST00000583100 276 ntBASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 AC008805.1-201ENST00000590892 364 ntBASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
CDC42BPAQ5VT25 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 CYP4F23P-201ENST00000593402 1579 ntBASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 AC020916.1-201ENST00000587762 1774 ntBASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 AC104784.1-201ENST00000473096 294 ntBASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 AC006453.1-201ENST00000636037 1257 ntBASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPAQ5VT25 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 AC026471.1-201ENST00000564629 3026 ntBASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 NOC2LP1-201ENST00000450578 752 ntBASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 AC006122.1-201ENST00000493323 440 ntBASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 PAM16-211ENST00000575848 518 ntTSL 3 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC22.85■■□□□ 1.25
CDC42BPAQ5VT25 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 AC023090.2-201ENST00000625182 2110 ntBASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms