Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 AP000593.2-201ENST00000542775 1433 ntBASIC13.23□□□□□ -0.29
LRRK2Q5S007 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRK2Q5S007 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRK2Q5S007 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRK2Q5S007 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRK2Q5S007 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRK2Q5S007 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRK2Q5S007 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRK2Q5S007 AC092171.3-201ENST00000610122 2651 ntBASIC13.23□□□□□ -0.29
LRRK2Q5S007 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRK2Q5S007 AC004522.1-201ENST00000419978 654 ntBASIC13.22□□□□□ -0.29
LRRK2Q5S007 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 AL135901.1-201ENST00000451812 333 ntBASIC13.22□□□□□ -0.29
LRRK2Q5S007 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 AP000911.2-201ENST00000534330 502 ntBASIC13.22□□□□□ -0.29
LRRK2Q5S007 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 RN7SL470P-201ENST00000583069 259 ntBASIC13.22□□□□□ -0.29
LRRK2Q5S007 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRK2Q5S007 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRK2Q5S007 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRK2Q5S007 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRK2Q5S007 AC060834.1-201ENST00000443027 2032 ntBASIC13.22□□□□□ -0.29
LRRK2Q5S007 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRK2Q5S007 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRK2Q5S007 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRK2Q5S007 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRK2Q5S007 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRK2Q5S007 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRK2Q5S007 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 MIR4472-1-201ENST00000584349 80 ntBASIC13.22□□□□□ -0.29
LRRK2Q5S007 AC073592.2-201ENST00000623062 780 ntBASIC13.22□□□□□ -0.29
LRRK2Q5S007 INE2-201ENST00000630399 1874 ntBASIC13.22□□□□□ -0.29
LRRK2Q5S007 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRK2Q5S007 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRK2Q5S007 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 AC004554.1-201ENST00000422830 1468 ntBASIC13.22□□□□□ -0.29
LRRK2Q5S007 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.22□□□□□ -0.29
LRRK2Q5S007 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRK2Q5S007 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRK2Q5S007 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRK2Q5S007 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRK2Q5S007 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRK2Q5S007 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRK2Q5S007 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC13.21□□□□□ -0.29
LRRK2Q5S007 AC090857.1-201ENST00000527400 390 ntBASIC13.21□□□□□ -0.29
LRRK2Q5S007 CR383656.3-201ENST00000551315 183 ntBASIC13.21□□□□□ -0.29
LRRK2Q5S007 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC13.21□□□□□ -0.29
LRRK2Q5S007 DUX4L46-201ENST00000566845 751 ntBASIC13.21□□□□□ -0.29
LRRK2Q5S007 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
LRRK2Q5S007 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.21□□□□□ -0.29
LRRK2Q5S007 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
LRRK2Q5S007 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRK2Q5S007 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRK2Q5S007 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRK2Q5S007 ENPP7P8-202ENST00000527856 1345 ntBASIC13.21□□□□□ -0.29
LRRK2Q5S007 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRK2Q5S007 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRK2Q5S007 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.21□□□□□ -0.29
LRRK2Q5S007 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LRRK2Q5S007 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.21□□□□□ -0.29
LRRK2Q5S007 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRK2Q5S007 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRK2Q5S007 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC13.21□□□□□ -0.29
LRRK2Q5S007 AC053503.3-201ENST00000448375 114 ntBASIC13.21□□□□□ -0.29
LRRK2Q5S007 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC13.21□□□□□ -0.29
LRRK2Q5S007 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRK2Q5S007 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRK2Q5S007 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.21□□□□□ -0.29
LRRK2Q5S007 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC13.21□□□□□ -0.29
LRRK2Q5S007 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
LRRK2Q5S007 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
LRRK2Q5S007 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LRRK2Q5S007 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRRK2Q5S007 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRRK2Q5S007 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms