Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC5Q00444 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC5Q00444 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.44□□□□□ -0.1
HOXC5Q00444 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC5Q00444 SPDYE17-201ENST00000412399 783 ntBASIC14.44□□□□□ -0.1
HOXC5Q00444 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXC5Q00444 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC5Q00444 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXC5Q00444 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC5Q00444 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
HOXC5Q00444 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HOXC5Q00444 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.44□□□□□ -0.1
HOXC5Q00444 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HOXC5Q00444 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.44□□□□□ -0.1
HOXC5Q00444 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.44□□□□□ -0.1
HOXC5Q00444 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.44□□□□□ -0.1
HOXC5Q00444 AC027612.4-201ENST00000605371 583 ntBASIC14.44□□□□□ -0.1
HOXC5Q00444 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXC5Q00444 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HOXC5Q00444 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXC5Q00444 AGAP7P-201ENST00000582299 2062 ntBASIC14.44□□□□□ -0.1
HOXC5Q00444 AGAP14-201ENST00000624701 2060 ntBASIC14.44□□□□□ -0.1
HOXC5Q00444 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC5Q00444 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC5Q00444 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC5Q00444 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXC5Q00444 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC5Q00444 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HOXC5Q00444 LINC00528-201ENST00000600723 2160 ntBASIC14.44□□□□□ -0.1
HOXC5Q00444 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
HOXC5Q00444 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC5Q00444 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC5Q00444 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXC5Q00444 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC5Q00444 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.44□□□□□ -0.1
HOXC5Q00444 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HOXC5Q00444 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.44□□□□□ -0.1
HOXC5Q00444 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
HOXC5Q00444 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.43□□□□□ -0.1
HOXC5Q00444 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXC5Q00444 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
HOXC5Q00444 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.43□□□□□ -0.1
HOXC5Q00444 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXC5Q00444 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXC5Q00444 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXC5Q00444 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXC5Q00444 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.43□□□□□ -0.1
HOXC5Q00444 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.43□□□□□ -0.1
HOXC5Q00444 TARDBPP1-201ENST00000442013 1203 ntBASIC14.43□□□□□ -0.1
HOXC5Q00444 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXC5Q00444 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.43□□□□□ -0.1
HOXC5Q00444 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.43□□□□□ -0.1
HOXC5Q00444 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.43□□□□□ -0.1
HOXC5Q00444 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.43□□□□□ -0.1
HOXC5Q00444 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.43□□□□□ -0.1
HOXC5Q00444 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HOXC5Q00444 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.43□□□□□ -0.1
HOXC5Q00444 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HOXC5Q00444 PCDHA3-202ENST00000532566 4594 ntBASIC14.42□□□□□ -0.1
HOXC5Q00444 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 CICP11-201ENST00000434745 2827 ntBASIC14.42□□□□□ -0.1
HOXC5Q00444 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HOXC5Q00444 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HOXC5Q00444 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HOXC5Q00444 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
HOXC5Q00444 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXC5Q00444 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXC5Q00444 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXC5Q00444 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.42□□□□□ -0.1
HOXC5Q00444 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HOXC5Q00444 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXC5Q00444 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXC5Q00444 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms