Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.1■□□□□ 0.33
LBX1P52954 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.1■□□□□ 0.33
LBX1P52954 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LBX1P52954 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LBX1P52954 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC17.1■□□□□ 0.33
LBX1P52954 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.1■□□□□ 0.33
LBX1P52954 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LBX1P52954 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.1■□□□□ 0.33
LBX1P52954 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LBX1P52954 AL590235.1-201ENST00000564650 861 ntBASIC17.1■□□□□ 0.33
LBX1P52954 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC17.1■□□□□ 0.33
LBX1P52954 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.1■□□□□ 0.33
LBX1P52954 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC17.1■□□□□ 0.33
LBX1P52954 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC17.1■□□□□ 0.33
LBX1P52954 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.1■□□□□ 0.33
LBX1P52954 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LBX1P52954 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.1■□□□□ 0.33
LBX1P52954 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.1■□□□□ 0.33
LBX1P52954 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LBX1P52954 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.1■□□□□ 0.33
LBX1P52954 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LBX1P52954 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.1■□□□□ 0.33
LBX1P52954 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LBX1P52954 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.1■□□□□ 0.33
LBX1P52954 AC022188.1-201ENST00000620960 1664 ntBASIC17.1■□□□□ 0.33
LBX1P52954 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LBX1P52954 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LBX1P52954 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.1■□□□□ 0.33
LBX1P52954 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LBX1P52954 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LBX1P52954 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
LBX1P52954 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LBX1P52954 AC138932.1-201ENST00000534164 6830 ntBASIC17.1■□□□□ 0.33
LBX1P52954 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LBX1P52954 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LBX1P52954 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LBX1P52954 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LBX1P52954 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LBX1P52954 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LBX1P52954 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.09■□□□□ 0.33
LBX1P52954 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LBX1P52954 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LBX1P52954 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
LBX1P52954 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LBX1P52954 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LBX1P52954 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC17.09■□□□□ 0.33
LBX1P52954 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.09■□□□□ 0.33
LBX1P52954 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC17.09■□□□□ 0.33
LBX1P52954 PPIA-208ENST00000489459 907 ntTSL 2 BASIC17.09■□□□□ 0.33
LBX1P52954 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LBX1P52954 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LBX1P52954 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LBX1P52954 CYP4F36P-201ENST00000589193 186 ntBASIC17.09■□□□□ 0.33
LBX1P52954 PPIA-210ENST00000620047 827 ntTSL 5 BASIC17.09■□□□□ 0.33
LBX1P52954 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LBX1P52954 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LBX1P52954 PHB-210ENST00000511832 1509 ntTSL 2 BASIC17.09■□□□□ 0.33
LBX1P52954 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LBX1P52954 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LBX1P52954 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LBX1P52954 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LBX1P52954 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LBX1P52954 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.08■□□□□ 0.33
LBX1P52954 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LBX1P52954 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LBX1P52954 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
LBX1P52954 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.08■□□□□ 0.33
LBX1P52954 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.08■□□□□ 0.33
LBX1P52954 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LBX1P52954 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LBX1P52954 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LBX1P52954 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
LBX1P52954 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.08■□□□□ 0.32
LBX1P52954 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LBX1P52954 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC17.08■□□□□ 0.32
LBX1P52954 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LBX1P52954 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LBX1P52954 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC17.08■□□□□ 0.32
LBX1P52954 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC17.08■□□□□ 0.32
LBX1P52954 OLA1P2-201ENST00000395519 1264 ntBASIC17.08■□□□□ 0.32
LBX1P52954 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LBX1P52954 GUSBP10-201ENST00000417412 665 ntBASIC17.08■□□□□ 0.32
LBX1P52954 AL929302.1-201ENST00000426556 871 ntBASIC17.08■□□□□ 0.32
LBX1P52954 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC17.08■□□□□ 0.32
LBX1P52954 VENTXP4-201ENST00000449029 958 ntBASIC17.08■□□□□ 0.32
LBX1P52954 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LBX1P52954 AC006529.1-201ENST00000459978 637 ntBASIC17.08■□□□□ 0.32
LBX1P52954 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.08■□□□□ 0.32
LBX1P52954 RN7SL582P-201ENST00000491078 279 ntBASIC17.08■□□□□ 0.32
LBX1P52954 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LBX1P52954 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC17.08■□□□□ 0.32
LBX1P52954 GOLGA2P7-209ENST00000560408 745 ntBASIC17.08■□□□□ 0.32
LBX1P52954 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.08■□□□□ 0.32
LBX1P52954 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC17.08■□□□□ 0.32
LBX1P52954 AC004466.2-201ENST00000614749 516 ntBASIC17.08■□□□□ 0.32
LBX1P52954 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LBX1P52954 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.08■□□□□ 0.32
LBX1P52954 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LBX1P52954 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LBX1P52954 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms