Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 KRT43P-201ENST00000434019 910 ntBASIC17.12■□□□□ 0.33
RFC5P40937 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.12■□□□□ 0.33
RFC5P40937 AC022137.2-201ENST00000503482 481 ntBASIC17.12■□□□□ 0.33
RFC5P40937 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.12■□□□□ 0.33
RFC5P40937 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.12■□□□□ 0.33
RFC5P40937 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.12■□□□□ 0.33
RFC5P40937 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.12■□□□□ 0.33
RFC5P40937 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.12■□□□□ 0.33
RFC5P40937 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.12■□□□□ 0.33
RFC5P40937 AC009090.5-201ENST00000624886 2285 ntBASIC17.12■□□□□ 0.33
RFC5P40937 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.12■□□□□ 0.33
RFC5P40937 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFC5P40937 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RFC5P40937 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RFC5P40937 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RFC5P40937 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RFC5P40937 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.11■□□□□ 0.33
RFC5P40937 ARSEP1-201ENST00000420443 635 ntBASIC17.11■□□□□ 0.33
RFC5P40937 AC112492.5-201ENST00000421897 457 ntBASIC17.11■□□□□ 0.33
RFC5P40937 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.11■□□□□ 0.33
RFC5P40937 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.11■□□□□ 0.33
RFC5P40937 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.11■□□□□ 0.33
RFC5P40937 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 AC004066.1-201ENST00000502488 802 ntBASIC17.11■□□□□ 0.33
RFC5P40937 AP001889.1-201ENST00000525414 633 ntBASIC17.11■□□□□ 0.33
RFC5P40937 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.11■□□□□ 0.33
RFC5P40937 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.11■□□□□ 0.33
RFC5P40937 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.11■□□□□ 0.33
RFC5P40937 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.11■□□□□ 0.33
RFC5P40937 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.11■□□□□ 0.33
RFC5P40937 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.11■□□□□ 0.33
RFC5P40937 AL022328.1-201ENST00000610050 478 ntBASIC17.11■□□□□ 0.33
RFC5P40937 AP005019.2-201ENST00000615104 511 ntBASIC17.11■□□□□ 0.33
RFC5P40937 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.11■□□□□ 0.33
RFC5P40937 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 AC090616.6-203ENST00000579186 1945 ntBASIC17.11■□□□□ 0.33
RFC5P40937 AC018665.1-201ENST00000622927 1362 ntBASIC17.11■□□□□ 0.33
RFC5P40937 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.11■□□□□ 0.33
RFC5P40937 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RFC5P40937 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RFC5P40937 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.11■□□□□ 0.33
RFC5P40937 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFC5P40937 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC5P40937 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC5P40937 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.1■□□□□ 0.33
RFC5P40937 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.1■□□□□ 0.33
RFC5P40937 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.1■□□□□ 0.33
RFC5P40937 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
RFC5P40937 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RFC5P40937 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC5P40937 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFC5P40937 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC5P40937 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFC5P40937 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFC5P40937 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.1■□□□□ 0.33
RFC5P40937 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.1■□□□□ 0.33
RFC5P40937 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.1■□□□□ 0.33
RFC5P40937 BOLA2P3-201ENST00000404566 256 ntBASIC17.1■□□□□ 0.33
RFC5P40937 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RFC5P40937 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.1■□□□□ 0.33
RFC5P40937 NUS1P3-201ENST00000423502 862 ntBASIC17.1■□□□□ 0.33
RFC5P40937 AL355864.2-201ENST00000447420 863 ntBASIC17.1■□□□□ 0.33
RFC5P40937 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.1■□□□□ 0.33
RFC5P40937 ACA64.2-201ENST00000459014 129 ntBASIC17.1■□□□□ 0.33
RFC5P40937 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.1■□□□□ 0.33
RFC5P40937 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.1■□□□□ 0.33
RFC5P40937 HILS1-202ENST00000545329 423 ntBASIC17.1■□□□□ 0.33
RFC5P40937 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RFC5P40937 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.1■□□□□ 0.33
RFC5P40937 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.1■□□□□ 0.33
RFC5P40937 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFC5P40937 AC134312.5-201ENST00000568031 1313 ntBASIC17.1■□□□□ 0.33
RFC5P40937 AC093525.8-201ENST00000624099 1342 ntBASIC17.1■□□□□ 0.33
RFC5P40937 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
RFC5P40937 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms