Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT3P12035 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT3P12035 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT3P12035 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
KRT3P12035 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
KRT3P12035 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT3P12035 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT3P12035 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT3P12035 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
KRT3P12035 AL133267.1-201ENST00000398220 340 ntBASIC16.42■□□□□ 0.22
KRT3P12035 PMS2P2-201ENST00000425039 1128 ntBASIC16.42■□□□□ 0.22
KRT3P12035 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT3P12035 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.42■□□□□ 0.22
KRT3P12035 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT3P12035 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT3P12035 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT3P12035 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT3P12035 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.42■□□□□ 0.22
KRT3P12035 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.42■□□□□ 0.22
KRT3P12035 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT3P12035 TIMM17BP1-201ENST00000545713 516 ntBASIC16.42■□□□□ 0.22
KRT3P12035 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
KRT3P12035 AC009407.1-201ENST00000568958 598 ntBASIC16.42■□□□□ 0.22
KRT3P12035 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.42■□□□□ 0.22
KRT3P12035 AC004461.2-201ENST00000629517 803 ntBASIC16.42■□□□□ 0.22
KRT3P12035 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT3P12035 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT3P12035 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT3P12035 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT3P12035 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT3P12035 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT3P12035 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
KRT3P12035 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT3P12035 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT3P12035 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT3P12035 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT3P12035 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT3P12035 BTBD7P1-201ENST00000447253 1453 ntBASIC16.42■□□□□ 0.22
KRT3P12035 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT3P12035 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
KRT3P12035 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT3P12035 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT3P12035 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT3P12035 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT3P12035 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KRT3P12035 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
KRT3P12035 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT3P12035 AC148477.4-201ENST00000613430 1793 ntBASIC16.41■□□□□ 0.22
KRT3P12035 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT3P12035 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT3P12035 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT3P12035 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT3P12035 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT3P12035 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT3P12035 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
KRT3P12035 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT3P12035 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
KRT3P12035 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
KRT3P12035 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT3P12035 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT3P12035 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT3P12035 AC114501.2-201ENST00000439631 535 ntBASIC16.41■□□□□ 0.22
KRT3P12035 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.41■□□□□ 0.22
KRT3P12035 RFPL4AP1-201ENST00000530883 850 ntBASIC16.41■□□□□ 0.22
KRT3P12035 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT3P12035 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT3P12035 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.41■□□□□ 0.22
KRT3P12035 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.41■□□□□ 0.22
KRT3P12035 AL390955.2-201ENST00000603032 514 ntBASIC16.41■□□□□ 0.22
KRT3P12035 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
KRT3P12035 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT3P12035 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT3P12035 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT3P12035 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
KRT3P12035 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT3P12035 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT3P12035 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
KRT3P12035 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT3P12035 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT3P12035 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT3P12035 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT3P12035 AC138969.3-201ENST00000546612 1459 ntBASIC16.41■□□□□ 0.22
KRT3P12035 AC138932.2-201ENST00000548268 1459 ntBASIC16.41■□□□□ 0.22
KRT3P12035 AC126755.4-201ENST00000549796 1459 ntBASIC16.41■□□□□ 0.22
KRT3P12035 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT3P12035 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT3P12035 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT3P12035 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
KRT3P12035 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
KRT3P12035 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KRT3P12035 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
KRT3P12035 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT3P12035 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT3P12035 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT3P12035 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT3P12035 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT3P12035 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT3P12035 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT3P12035 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
KRT3P12035 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms