Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PDE6DO43924 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
PDE6DO43924 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
PDE6DO43924 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PDE6DO43924 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PDE6DO43924 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PDE6DO43924 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PDE6DO43924 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PDE6DO43924 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.11□□□□□ -0.47
PDE6DO43924 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PDE6DO43924 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PDE6DO43924 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PDE6DO43924 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
PDE6DO43924 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PDE6DO43924 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
PDE6DO43924 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.11□□□□□ -0.47
PDE6DO43924 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PDE6DO43924 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.11□□□□□ -0.47
PDE6DO43924 MST1P2-201ENST00000457982 2291 ntBASIC12.11□□□□□ -0.47
PDE6DO43924 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PDE6DO43924 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.11□□□□□ -0.47
PDE6DO43924 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
PDE6DO43924 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
PDE6DO43924 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
PDE6DO43924 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
PDE6DO43924 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.1□□□□□ -0.47
PDE6DO43924 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
PDE6DO43924 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.1□□□□□ -0.47
PDE6DO43924 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.1□□□□□ -0.47
PDE6DO43924 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
PDE6DO43924 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
PDE6DO43924 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
PDE6DO43924 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.1□□□□□ -0.47
PDE6DO43924 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.1□□□□□ -0.47
PDE6DO43924 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
PDE6DO43924 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.1□□□□□ -0.47
PDE6DO43924 RCN1P1-201ENST00000400413 996 ntBASIC12.1□□□□□ -0.47
PDE6DO43924 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 AC104819.1-201ENST00000504587 486 ntBASIC12.1□□□□□ -0.47
PDE6DO43924 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.1□□□□□ -0.47
PDE6DO43924 AC106795.1-205ENST00000512851 1056 ntBASIC12.1□□□□□ -0.47
PDE6DO43924 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.1□□□□□ -0.47
PDE6DO43924 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.1□□□□□ -0.47
PDE6DO43924 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
PDE6DO43924 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.1□□□□□ -0.47
PDE6DO43924 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
PDE6DO43924 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.1□□□□□ -0.47
PDE6DO43924 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.1□□□□□ -0.47
PDE6DO43924 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.1□□□□□ -0.47
PDE6DO43924 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.1□□□□□ -0.47
PDE6DO43924 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.1□□□□□ -0.47
PDE6DO43924 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.1□□□□□ -0.47
PDE6DO43924 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
PDE6DO43924 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
PDE6DO43924 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
PDE6DO43924 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 AC015802.1-201ENST00000588104 1449 ntBASIC12.1□□□□□ -0.47
PDE6DO43924 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.1□□□□□ -0.47
PDE6DO43924 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PDE6DO43924 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.09□□□□□ -0.47
PDE6DO43924 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
PDE6DO43924 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.09□□□□□ -0.47
PDE6DO43924 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.09□□□□□ -0.47
PDE6DO43924 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
PDE6DO43924 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PDE6DO43924 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
PDE6DO43924 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms