Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSH5O43196 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
MSH5O43196 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSH5O43196 SLC14A1-203ENST00000415427 1554 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
MSH5O43196 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSH5O43196 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC21.91■■□□□ 1.1
MSH5O43196 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.91■■□□□ 1.1
MSH5O43196 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSH5O43196 CASC19-248ENST00000641674 1356 ntBASIC21.91■■□□□ 1.1
MSH5O43196 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
MSH5O43196 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.91■■□□□ 1.1
MSH5O43196 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MSH5O43196 PSMC1P11-201ENST00000405257 1317 ntBASIC21.91■■□□□ 1.1
MSH5O43196 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSH5O43196 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSH5O43196 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MSH5O43196 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MSH5O43196 HMGN1P14-201ENST00000412459 517 ntBASIC21.91■■□□□ 1.1
MSH5O43196 Z73361.1-201ENST00000423690 612 ntBASIC21.91■■□□□ 1.1
MSH5O43196 MTND1P20-201ENST00000430341 950 ntBASIC21.91■■□□□ 1.1
MSH5O43196 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
MSH5O43196 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC21.91■■□□□ 1.1
MSH5O43196 AC106868.1-201ENST00000505272 992 ntBASIC21.91■■□□□ 1.1
MSH5O43196 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.91■■□□□ 1.1
MSH5O43196 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC21.91■■□□□ 1.1
MSH5O43196 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC21.91■■□□□ 1.1
MSH5O43196 MIR4801-201ENST00000582704 82 ntBASIC21.91■■□□□ 1.1
MSH5O43196 GTF2IP6-201ENST00000583143 541 ntBASIC21.91■■□□□ 1.1
MSH5O43196 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC21.91■■□□□ 1.1
MSH5O43196 LINC02211-204ENST00000642024 1070 ntBASIC21.91■■□□□ 1.1
MSH5O43196 AC009949.1-201ENST00000623048 1830 ntBASIC21.91■■□□□ 1.1
MSH5O43196 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC21.91■■□□□ 1.1
MSH5O43196 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MSH5O43196 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
MSH5O43196 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
MSH5O43196 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSH5O43196 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSH5O43196 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
MSH5O43196 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MSH5O43196 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MSH5O43196 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MSH5O43196 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
MSH5O43196 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
MSH5O43196 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
MSH5O43196 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MSH5O43196 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
MSH5O43196 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MSH5O43196 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
MSH5O43196 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MSH5O43196 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MSH5O43196 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC21.9■■□□□ 1.1
MSH5O43196 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC21.9■■□□□ 1.1
MSH5O43196 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.9■■□□□ 1.1
MSH5O43196 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC21.9■■□□□ 1.1
MSH5O43196 USP12PY-201ENST00000427677 1064 ntBASIC21.9■■□□□ 1.1
MSH5O43196 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.9■■□□□ 1.1
MSH5O43196 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC21.9■■□□□ 1.1
MSH5O43196 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC21.9■■□□□ 1.1
MSH5O43196 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MSH5O43196 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.9■■□□□ 1.1
MSH5O43196 AC026150.2-201ENST00000564693 1156 ntBASIC21.9■■□□□ 1.1
MSH5O43196 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MSH5O43196 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
MSH5O43196 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC21.9■■□□□ 1.1
MSH5O43196 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.9■■□□□ 1.1
MSH5O43196 AC125494.3-201ENST00000602759 455 ntBASIC21.9■■□□□ 1.1
MSH5O43196 AC093765.1-201ENST00000603758 881 ntBASIC21.9■■□□□ 1.1
MSH5O43196 AC016957.2-201ENST00000616998 848 ntBASIC21.9■■□□□ 1.1
MSH5O43196 AC092159.4-201ENST00000624944 550 ntBASIC21.9■■□□□ 1.1
MSH5O43196 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MSH5O43196 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MSH5O43196 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC21.9■■□□□ 1.1
MSH5O43196 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
MSH5O43196 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC21.89■■□□□ 1.1
MSH5O43196 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
MSH5O43196 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.89■■□□□ 1.1
MSH5O43196 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
MSH5O43196 ACMSD-201ENST00000356140 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MSH5O43196 ACMSD-202ENST00000392928 1307 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
MSH5O43196 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MSH5O43196 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.89■■□□□ 1.1
MSH5O43196 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
MSH5O43196 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.89■■□□□ 1.09
MSH5O43196 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
MSH5O43196 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MSH5O43196 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.89■■□□□ 1.09
MSH5O43196 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC21.89■■□□□ 1.09
MSH5O43196 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MSH5O43196 AC092910.2-201ENST00000491262 348 ntBASIC21.89■■□□□ 1.09
MSH5O43196 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC21.89■■□□□ 1.09
MSH5O43196 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MSH5O43196 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
MSH5O43196 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC21.89■■□□□ 1.09
MSH5O43196 CR383656.12-201ENST00000549567 513 ntBASIC21.89■■□□□ 1.09
MSH5O43196 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
MSH5O43196 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.89■■□□□ 1.09
MSH5O43196 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MSH5O43196 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
MSH5O43196 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC21.89■■□□□ 1.09
MSH5O43196 AL450336.1-201ENST00000605180 586 ntBASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms