Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC24.26■■□□□ 1.47
CHD1O14646 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CHD1O14646 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
CHD1O14646 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHD1O14646 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC24.26■■□□□ 1.47
CHD1O14646 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CHD1O14646 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD1O14646 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD1O14646 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CHD1O14646 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD1O14646 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC24.25■■□□□ 1.47
CHD1O14646 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC24.25■■□□□ 1.47
CHD1O14646 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC24.25■■□□□ 1.47
CHD1O14646 PPIA-208ENST00000489459 907 ntTSL 2 BASIC24.25■■□□□ 1.47
CHD1O14646 ELP5-212ENST00000574255 671 ntTSL 2 BASIC24.25■■□□□ 1.47
CHD1O14646 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC24.25■■□□□ 1.47
CHD1O14646 PPIA-210ENST00000620047 827 ntTSL 5 BASIC24.25■■□□□ 1.47
CHD1O14646 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
CHD1O14646 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
CHD1O14646 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
CHD1O14646 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
CHD1O14646 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
CHD1O14646 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
CHD1O14646 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
CHD1O14646 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD1O14646 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD1O14646 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD1O14646 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD1O14646 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC24.24■■□□□ 1.47
CHD1O14646 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CHD1O14646 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CHD1O14646 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHD1O14646 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC24.24■■□□□ 1.47
CHD1O14646 AC006548.2-201ENST00000605217 529 ntBASIC24.24■■□□□ 1.47
CHD1O14646 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHD1O14646 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
CHD1O14646 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
CHD1O14646 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHD1O14646 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC24.24■■□□□ 1.47
CHD1O14646 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC24.24■■□□□ 1.47
CHD1O14646 AL360270.3-201ENST00000609118 1348 ntBASIC24.24■■□□□ 1.47
CHD1O14646 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHD1O14646 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
CHD1O14646 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC24.24■■□□□ 1.47
CHD1O14646 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC24.24■■□□□ 1.47
CHD1O14646 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHD1O14646 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHD1O14646 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC24.24■■□□□ 1.47
CHD1O14646 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC24.24■■□□□ 1.47
CHD1O14646 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC24.24■■□□□ 1.47
CHD1O14646 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC24.24■■□□□ 1.47
CHD1O14646 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC24.24■■□□□ 1.47
CHD1O14646 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC24.23■■□□□ 1.47
CHD1O14646 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
CHD1O14646 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
CHD1O14646 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHD1O14646 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHD1O14646 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CHD1O14646 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC24.23■■□□□ 1.47
CHD1O14646 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CHD1O14646 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHD1O14646 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC24.23■■□□□ 1.47
CHD1O14646 RN7SL494P-201ENST00000461517 304 ntBASIC24.23■■□□□ 1.47
CHD1O14646 REXO1L4P-201ENST00000605109 1937 ntBASIC24.23■■□□□ 1.47
CHD1O14646 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHD1O14646 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CHD1O14646 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC24.22■■□□□ 1.47
CHD1O14646 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD1O14646 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC24.22■■□□□ 1.47
CHD1O14646 SERBP1P2-201ENST00000436888 1164 ntBASIC24.22■■□□□ 1.47
CHD1O14646 AC083801.1-201ENST00000491689 358 ntBASIC24.22■■□□□ 1.47
CHD1O14646 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC24.22■■□□□ 1.47
CHD1O14646 AC010632.2-201ENST00000588369 1224 ntBASIC24.22■■□□□ 1.47
CHD1O14646 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
CHD1O14646 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC24.22■■□□□ 1.47
CHD1O14646 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CHD1O14646 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
CHD1O14646 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD1O14646 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD1O14646 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD1O14646 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD1O14646 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC24.21■■□□□ 1.47
CHD1O14646 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD1O14646 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD1O14646 CTSL-202ENST00000342020 933 ntTSL 2 BASIC24.21■■□□□ 1.47
CHD1O14646 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC24.21■■□□□ 1.47
CHD1O14646 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC24.21■■□□□ 1.47
CHD1O14646 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC24.21■■□□□ 1.47
CHD1O14646 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
CHD1O14646 AC090510.3-201ENST00000615831 821 ntBASIC24.21■■□□□ 1.47
CHD1O14646 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC24.21■■□□□ 1.47
CHD1O14646 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHD1O14646 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHD1O14646 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD1O14646 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
CHD1O14646 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
CHD1O14646 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD1O14646 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC24.21■■□□□ 1.47
CHD1O14646 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD1O14646 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms