Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 AL160191.2-201ENST00000603975 601 ntBASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 MARK2P16-201ENST00000605714 1723 ntBASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 TMBIM7P-202ENST00000641474 1516 ntBASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 HNRNPA1P25-201ENST00000422644 937 ntBASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 AC007881.1-201ENST00000437460 187 ntBASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 CSNK1G2P1-201ENST00000442675 955 ntBASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 BPIFB5P-201ENST00000457066 1099 ntBASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 AC090136.2-201ENST00000517809 420 ntBASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 LY6E-215ENST00000523847 427 ntTSL 3 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 SRP14-208ENST00000560773 468 ntTSL 3 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 AC008972.2-201ENST00000606587 494 ntBASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 AC005865.2-202ENST00000635814 725 ntBASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
COL25A1Q9BXS0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 AC134407.2-201ENST00000625089 1978 ntBASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 OR2A1-AS1-210ENST00000496968 531 ntBASIC15.28■□□□□ 0.04
COL25A1Q9BXS0 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms