Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
SNX18Q96RF0 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SNX18Q96RF0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.27□□□□□ -0.12
SNX18Q96RF0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SNX18Q96RF0 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
SNX18Q96RF0 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.27□□□□□ -0.12
SNX18Q96RF0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SNX18Q96RF0 BNIP3P1-202ENST00000550043 1585 ntBASIC14.27□□□□□ -0.12
SNX18Q96RF0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SNX18Q96RF0 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SNX18Q96RF0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SNX18Q96RF0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SNX18Q96RF0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.27□□□□□ -0.12
SNX18Q96RF0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.27□□□□□ -0.12
SNX18Q96RF0 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.27□□□□□ -0.12
SNX18Q96RF0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.27□□□□□ -0.12
SNX18Q96RF0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
SNX18Q96RF0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNX18Q96RF0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SNX18Q96RF0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNX18Q96RF0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.27□□□□□ -0.13
SNX18Q96RF0 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.27□□□□□ -0.13
SNX18Q96RF0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.27□□□□□ -0.13
SNX18Q96RF0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.27□□□□□ -0.13
SNX18Q96RF0 AP000842.3-202ENST00000569238 1080 ntBASIC14.27□□□□□ -0.13
SNX18Q96RF0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNX18Q96RF0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SNX18Q96RF0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.27□□□□□ -0.13
SNX18Q96RF0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SNX18Q96RF0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.27□□□□□ -0.13
SNX18Q96RF0 AC026120.1-201ENST00000611536 926 ntBASIC14.27□□□□□ -0.13
SNX18Q96RF0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
SNX18Q96RF0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.27□□□□□ -0.13
SNX18Q96RF0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
SNX18Q96RF0 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.27□□□□□ -0.13
SNX18Q96RF0 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.27□□□□□ -0.13
SNX18Q96RF0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SNX18Q96RF0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNX18Q96RF0 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNX18Q96RF0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SNX18Q96RF0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.27□□□□□ -0.13
SNX18Q96RF0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNX18Q96RF0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.27□□□□□ -0.13
SNX18Q96RF0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SNX18Q96RF0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SNX18Q96RF0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SNX18Q96RF0 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.27□□□□□ -0.13
SNX18Q96RF0 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 AC105250.1-201ENST00000509378 2057 ntBASIC14.26□□□□□ -0.13
SNX18Q96RF0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 AL139010.1-201ENST00000454878 894 ntBASIC14.26□□□□□ -0.13
SNX18Q96RF0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 RNA5SP410-201ENST00000516285 106 ntBASIC14.26□□□□□ -0.13
SNX18Q96RF0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 AC243562.1-201ENST00000560672 389 ntBASIC14.26□□□□□ -0.13
SNX18Q96RF0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 AC026979.3-201ENST00000607315 403 ntBASIC14.26□□□□□ -0.13
SNX18Q96RF0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 AC087481.3-201ENST00000602886 1894 ntBASIC14.26□□□□□ -0.13
SNX18Q96RF0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.26□□□□□ -0.13
SNX18Q96RF0 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SNX18Q96RF0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms